Classification of intrinsically disordered regions and proteins
Over the past decade, we have observed a massive increase in the amount of information
describing protein sequences from a variety of organisms. 1, 2 While this may reflect the …
describing protein sequences from a variety of organisms. 1, 2 While this may reflect the …
The plant invertase/pectin methylesterase inhibitor superfamily
Invertases (INVs) and pectin methylesterases (PMEs) are essential enzymes coordinating
carbohydrate metabolism, stress responses, and sugar signaling. INVs catalyzes the …
carbohydrate metabolism, stress responses, and sugar signaling. INVs catalyzes the …
GeneMANIA update 2018
M Franz, H Rodriguez, C Lopes, K Zuberi… - Nucleic acids …, 2018 - academic.oup.com
Abstract GeneMANIA (http://genemania. org) is a flexible user-friendly web site for
generating hypotheses about gene function, analyzing gene lists and prioritizing genes for …
generating hypotheses about gene function, analyzing gene lists and prioritizing genes for …
Phase separation of a yeast prion protein promotes cellular fitness
INTRODUCTION The formation of dynamic, membraneless compartments using intracellular
phase transitions such as phase separation and gelation provides an efficient way for cells …
phase transitions such as phase separation and gelation provides an efficient way for cells …
The SCOP database in 2020: expanded classification of representative family and superfamily domains of known protein structures
Abstract The Structural Classification of Proteins (SCOP) database is a classification of
protein domains organised according to their evolutionary and structural relationships. We …
protein domains organised according to their evolutionary and structural relationships. We …
Genome-wide subcellular protein map for the flagellate parasite Trypanosoma brucei
K Billington, C Halliday, R Madden, P Dyer… - Nature …, 2023 - nature.com
Trypanosoma brucei is a model trypanosomatid, an important group of human, animal and
plant unicellular parasites. Understanding their complex cell architecture and life cycle is …
plant unicellular parasites. Understanding their complex cell architecture and life cycle is …
The Ensembl gene annotation system
The Ensembl gene annotation system has been used to annotate over 70 different
vertebrate species across a wide range of genome projects. Furthermore, it generates the …
vertebrate species across a wide range of genome projects. Furthermore, it generates the …
Evolutionary genomics of the cold-adapted diatom Fragilariopsis cylindrus
Abstract The Southern Ocean houses a diverse and productive community of organisms,.
Unicellular eukaryotic diatoms are the main primary producers in this environment, where …
Unicellular eukaryotic diatoms are the main primary producers in this environment, where …
Predicting the functional, molecular, and phenotypic consequences of amino acid substitutions using hidden Markov models
The rate at which nonsynonymous single nucleotide polymorphisms (ns SNP s) are being
identified in the human genome is increasing dramatically owing to advances in whole …
identified in the human genome is increasing dramatically owing to advances in whole …
SCOPe: Structural Classification of Proteins—extended, integrating SCOP and ASTRAL data and classification of new structures
Abstract Structural Classification of Proteins—extended (SCOPe, http://scop. berkeley. edu)
is a database of protein structural relationships that extends the SCOP database. SCOP is a …
is a database of protein structural relationships that extends the SCOP database. SCOP is a …