PubTator 3.0: an AI-powered literature resource for unlocking biomedical knowledge
Abstract PubTator 3.0 (https://www. ncbi. nlm. nih. gov/research/pubtator3/) is a biomedical
literature resource using state-of-the-art AI techniques to offer semantic and relation …
literature resource using state-of-the-art AI techniques to offer semantic and relation …
Whole genome analysis reveals the diversity and evolutionary relationships between necrotic enteritis-causing strains of Clostridium perfringens
Background Clostridium perfringens causes a range of diseases in animals and humans
including necrotic enteritis in chickens and food poisoning and gas gangrene in humans …
including necrotic enteritis in chickens and food poisoning and gas gangrene in humans …
The novel anti-phage system Shield co-opts an RmuC domain to mediate phage defense across Pseudomonas species
Competitive bacteria-bacteriophage interactions have resulted in the evolution of a plethora
of bacterial defense systems preventing phage propagation. In recent years, computational …
of bacterial defense systems preventing phage propagation. In recent years, computational …
A single unidirectional piRNA cluster similar to the flamenco locus is the major source of EVE-derived transcription and small RNAs in Aedes aegypti mosquitoes
Endogenous viral elements (EVEs) are found in many eukaryotic genomes. Despite
considerable knowledge about genomic elements such as transposons (TEs) and …
considerable knowledge about genomic elements such as transposons (TEs) and …
Systematic review of the preclinical technology readiness of orthopedic gene therapy and outlook for clinical translation
P Wilkinson, IY Bozo, T Braxton, P Just… - … in Bioengineering and …, 2021 - frontiersin.org
Bone defects and improper healing of fractures are an increasing public health burden, and
there is an unmet clinical need in their successful repair. Gene therapy has been proposed …
there is an unmet clinical need in their successful repair. Gene therapy has been proposed …
Validation of a semiautomated natural language processing–based procedure for meta-analysis of cancer susceptibility gene penetrance
PURPOSE Quantifying the risk of cancer associated with pathogenic mutations in germline
cancer susceptibility genes—that is, penetrance—enables the personalization of preventive …
cancer susceptibility genes—that is, penetrance—enables the personalization of preventive …
Topic diffusion analysis of a weighted citation network in biomedical literature
M Kim, I Baek, M Song - Journal of the Association for …, 2018 - Wiley Online Library
In this study, we propose a framework for detecting topic evolutions in weighted citation
networks. Citation networks are important in studying knowledge flows; however, citation …
networks. Citation networks are important in studying knowledge flows; however, citation …
Automated research impact assessment: a new bibliometrics approach
CH Drew, KG Pettibone, FO Finch, D Giles, P Jordan - Scientometrics, 2016 - Springer
As federal programs are held more accountable for their research investments, The National
Institute of Environmental Health Sciences (NIEHS) has developed a new method to quantify …
Institute of Environmental Health Sciences (NIEHS) has developed a new method to quantify …
Relation extraction for biological pathway construction using node2vec
Background Systems biology is an important field for understanding whole biological
mechanisms composed of interactions between biological components. One approach for …
mechanisms composed of interactions between biological components. One approach for …
PAGER web APP: an interactive, online gene set and network interpretation tool for functional genomics
Functional genomics studies have helped researchers annotate differentially expressed
gene lists, extract gene expression signatures, and identify biological pathways from omics …
gene lists, extract gene expression signatures, and identify biological pathways from omics …