Circular RNAs' cap-independent translation protein and its roles in carcinomas

L He, C Man, S **ang, L Yao, X Wang, Y Fan - Molecular cancer, 2021 - Springer
Circular RNAs a kind of covalently closed RNA and widely expressed in eukaryotes.
CircRNAs are involved in a variety of physiological and pathological processes, but their …

Intron retention and its impact on gene expression and protein diversity: A review and a practical guide

DF Grabski, L Broseus, B Kumari… - Wiley …, 2021 - Wiley Online Library
Intron retention (IR) occurs when a complete and unspliced intron remains in mature mRNA.
An increasing body of literature has demonstrated a major role for IR in numerous biological …

Dynamic methylome of internal mRNA N7-methylguanosine and its regulatory role in translation

L Malbec, T Zhang, YS Chen, Y Zhang, BF Sun, BY Shi… - Cell research, 2019 - nature.com
Over 150 types of RNA modifications are identified in RNA molecules. Transcriptome
profiling is one of the key steps in decoding the epitranscriptomic panorama of these …

Targeting EIF4A triggers an interferon response to synergize with chemotherapy and suppress triple-negative breast cancer

N Zhao, EB Kabotyanski, AB Saltzman… - The Journal of …, 2023 - Am Soc Clin Investig
Protein synthesis is frequently dysregulated in cancer and selective inhibition of mRNA
translation represents an attractive cancer therapy. Here, we show that therapeutically …

[HTML][HTML] Pharmacological inhibition of arachidonate 12-lipoxygenase ameliorates myocardial ischemia-reperfusion injury in multiple species

XJ Zhang, X Liu, M Hu, GJ Zhao, D Sun, X Cheng… - Cell metabolism, 2021 - cell.com
Myocardial ischemia-reperfusion (MIR) injury is a major cause of adverse outcomes of
revascularization after myocardial infarction. To identify the fundamental regulator of …

Altered ribosomal function and protein synthesis caused by tau

HT Evans, D Taylor, A Kneynsberg, LG Bodea… - Acta Neuropathologica …, 2021 - Springer
The synthesis of new proteins is a fundamental aspect of cellular life and is required for
many neurological processes, including the formation, updating and extinction of long-term …

Systems approaches identify the consequences of monosomy in somatic human cells

NK Chunduri, P Menges, X Zhang, A Wieland… - Nature …, 2021 - nature.com
Chromosome loss that results in monosomy is detrimental to viability, yet it is frequently
observed in cancers. How cancers survive with monosomy is unknown. Using p53-deficient …

The effects of codon bias and optimality on mRNA and protein regulation

F Hia, O Takeuchi - Cellular and Molecular Life Sciences, 2021 - Springer
The central dogma of molecular biology entails that genetic information is transferred from
nucleic acid to proteins. Notwithstanding retro-transcribing genetic elements, DNA is …

Interaction of the La-related protein Slf1 with colliding ribosomes maintains translation of oxidative-stress responsive mRNAs

MD Jennings, P Srivastava, CJ Kershaw… - Nucleic Acids …, 2023 - academic.oup.com
In response to oxidative stress cells reprogram gene expression to enhance levels of
antioxidant enzymes and promote survival. In Saccharomyces cerevisiae the polysome …

Selective footprinting of 40S and 80S ribosome subpopulations (Sel-TCP-seq) to study translation and its control

S Wagner, J Bohlen, A Herrmannova, J Jelínek… - Nature …, 2022 - nature.com
Multiple aspects of mRNA translation are subject to regulation. Here we present a ribosome
footprinting protocol to determine the location and composition of 40S and 80S ribosome …