Regulation of the replication cycle: conserved and diverse regulatory systems for DnaA and oriC

T Katayama, S Ozaki, K Keyamura… - Nature Reviews …, 2010 - nature.com
Chromosomal replication must be limited to once and only once per cell cycle. This is
accomplished by multiple regulatory pathways that govern initiator proteins and replication …

The roles of nucleoid-associated proteins and topoisomerases in chromosome structure, strand segregation, and the generation of phenotypic heterogeneity in …

V Norris, C Kayser, G Muskhelishvili… - FEMS Microbiology …, 2023 - academic.oup.com
How to adapt to a changing environment is a fundamental, recurrent problem confronting
cells. One solution is for cells to organize their constituents into a limited number of spatially …

Helicase loading at chromosomal origins of replication

SP Bell, JM Kaguni - Cold Spring Harbor perspectives in …, 2013 - cshperspectives.cshlp.org
Loading of the replicative DNA helicase at origins of replication is of central importance in
DNA replication. As the first of the replication fork proteins assemble at chromosomal origins …

Organization and function of anionic phospholipids in bacteria

TY Lin, DB Weibel - Applied microbiology and biotechnology, 2016 - Springer
In addition to playing a central role as a permeability barrier for controlling the diffusion of
molecules and ions in and out of bacterial cells, phospholipid (PL) membranes regulate the …

Variation of the folding and dynamics of the Escherichia coli chromosome with growth conditions

N Hadizadeh Yazdi, CC Guet… - Molecular …, 2012 - Wiley Online Library
We examine whether the E scherichia coli chromosome is folded into a self‐adherent
nucleoprotein complex, or alternately is a confined but otherwise unconstrained self …

Regulation of DnaA assembly and activity: taking directions from the genome

AC Leonard, JE Grimwade - Annual review of microbiology, 2011 - annualreviews.org
To ensure proper timing of chromosome duplication during the cell cycle, bacteria must
carefully regulate the activity of initiator protein DnaA and its interactions with the unique …

The linker domain of the initiator DnaA contributes to its ATP binding and membrane association in E. coli chromosomal replication

Y Hou, P Kumar, M Aggarwal, F Sarkari, KM Wolcott… - Science …, 2022 - science.org
DnaA, the initiator of Escherichia coli chromosomal replication, has in its adenosine
triphosphatase (ATPase) domain residues required for adenosine 5′-triphosphate (ATP) …

DnaA structure, function, and dynamics in the initiation at the chromosomal origin

S Ozaki, T Katayama - Plasmid, 2009 - Elsevier
Escherichia coli DnaA is the initiator of chromosomal replication. Multiple ATP-DnaA
molecules assemble at the oriC replication origin in a highly regulated manner, and the …

Rapid turnover of DnaA at replication origin regions contributes to initiation control of DNA replication

K Schenk, AB Hervás, TC Rösch, M Eisemann… - PLoS …, 2017 - journals.plos.org
DnaA is a conserved key regulator of replication initiation in bacteria, and is homologous to
ORC proteins in archaea and in eukaryotic cells. The ATPase binds to several high affinity …

Hypothesis: Bacteria live on the edge of phase transitions with a cell cycle regulated by a water-clock

V Norris - Theory in Biosciences, 2024 - Springer
A fundamental problem in biology is how cells obtain the reproducible, coherent phenotypes
needed for natural selection to act or, put differently, how cells manage to limit their …