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Liquid–liquid phase separation by intrinsically disordered protein regions of viruses: Roles in viral life cycle and control of virus–host interactions
Intrinsically disordered proteins (IDPs) are unable to adopt a unique 3D structure under
physiological conditions and thus exist as highly dynamic conformational ensembles. IDPs …
physiological conditions and thus exist as highly dynamic conformational ensembles. IDPs …
Tutorial: a guide for the selection of fast and accurate computational tools for the prediction of intrinsic disorder in proteins
Intrinsic disorder is instrumental for a wide range of protein functions, and its analysis, using
computational predictions from primary structures, complements secondary and tertiary …
computational predictions from primary structures, complements secondary and tertiary …
IUPred3: prediction of protein disorder enhanced with unambiguous experimental annotation and visualization of evolutionary conservation
Intrinsically disordered proteins and protein regions (IDPs/IDRs) exist without a single well-
defined conformation. They carry out important biological functions with multifaceted roles …
defined conformation. They carry out important biological functions with multifaceted roles …
flDPnn: Accurate intrinsic disorder prediction with putative propensities of disorder functions
Identification of intrinsic disorder in proteins relies in large part on computational predictors,
which demands that their accuracy should be high. Since intrinsic disorder carries out a …
which demands that their accuracy should be high. Since intrinsic disorder carries out a …
DEPICTER2: a comprehensive webserver for intrinsic disorder and disorder function prediction
Intrinsic disorder in proteins is relatively abundant in nature and essential for a broad
spectrum of cellular functions. While disorder can be accurately predicted from protein …
spectrum of cellular functions. While disorder can be accurately predicted from protein …
DisoLipPred: accurate prediction of disordered lipid-binding residues in protein sequences with deep recurrent networks and transfer learning
Motivation Intrinsically disordered protein regions interact with proteins, nucleic acids and
lipids. Regions that bind lipids are implicated in a wide spectrum of cellular functions and …
lipids. Regions that bind lipids are implicated in a wide spectrum of cellular functions and …
Computational prediction of disordered binding regions
One of the key features of intrinsically disordered regions (IDRs) is their ability to interact
with a broad range of partner molecules. Multiple types of interacting IDRs were identified …
with a broad range of partner molecules. Multiple types of interacting IDRs were identified …
DescribePROT: database of amino acid-level protein structure and function predictions
We present DescribePROT, the database of predicted amino acid-level descriptors of
structure and function of proteins. DescribePROT delivers a comprehensive collection of 13 …
structure and function of proteins. DescribePROT delivers a comprehensive collection of 13 …
Comparative evaluation of AlphaFold2 and disorder predictors for prediction of intrinsic disorder, disorder content and fully disordered proteins
We expand studies of AlphaFold2 (AF2) in the context of intrinsic disorder prediction by
comparing it against a broad selection of 20 accurate, popular and recently released …
comparing it against a broad selection of 20 accurate, popular and recently released …
Surveying over 100 predictors of intrinsic disorder in proteins
Introduction Intrinsic disorder prediction field develops, assesses, and deploys
computational predictors of disorder in protein sequences and constructs and disseminates …
computational predictors of disorder in protein sequences and constructs and disseminates …