Targeted capture in evolutionary and ecological genomics

MR Jones, JM Good - Molecular ecology, 2016 - Wiley Online Library
The rapid expansion of next‐generation sequencing has yielded a powerful array of tools to
address fundamental biological questions at a scale that was inconceivable just a few years …

[HTML][HTML] A review of the genus Hemidactylus Goldfuss, 1820 (Squamata: Gekkonidae) from Angola, with the description of two new species

LMP Ceriaco, I Agarwal, MP Marques, AM Bauer - Zootaxa, 2020 - mapress.com
Abstract The genus Hemidactylus in Angola is represented by six species, all of them part of
taxonomically and nomenclaturally challenging species complexes. We present a detailed …

Phylogeny of bent-toed geckos (Cyrtodactylus) reveals a west to east pattern of diversification

PL Wood Jr, MP Heinicke, TR Jackman… - Molecular phylogenetics …, 2012 - Elsevier
The Asian/Pacific genus Cyrtodactylus is the most diverse and among the most widely
distributed genera of geckos, and more species are continually being discovered. Major …

[HTML][HTML] Species delimitation: a decade after the renaissance

A Camargo - The species problem-ongoing issues, 2013 - intechopen.com
A decade ago Sites and Marshall [1] described the empirical practice of species delimitation
as “a Renaissance issue in systematic biology”. At the time there was an odd disconnect …

A mid‐P leistocene rainforest corridor enabled synchronous invasions of the A tlantic F orest by A mazonian anole lizards

I Prates, D Rivera, MT Rodrigues… - Molecular …, 2016 - Wiley Online Library
Shifts in the geographic distribution of habitats over time can promote dispersal and
vicariance, thereby influencing large‐scale biogeographic patterns and ecological …

Sequence capture using PCR‐generated probes: A cost‐effective method of targeted high‐throughput sequencing for nonmodel organisms

JV Peñalba, LL Smith, MA Tonione… - Molecular ecology …, 2014 - Wiley Online Library
Recent advances in high‐throughput sequencing library preparation and subgenomic
enrichment methods have opened new avenues for population genetics and phylogenetics …

A versatile and highly efficient toolkit including 102 nuclear markers for vertebrate phylogenomics, tested by resolving the higher level relationships of the Caudata

XX Shen, D Liang, YJ Feng, MY Chen… - Molecular Biology and …, 2013 - academic.oup.com
Resolving difficult nodes for any part of the vertebrate tree of life often requires analyzing a
large number of loci. Develo** molecular markers that are workable for the groups of …

Resolving the higher-order phylogenetic relationships of the circumtropical Mabuya group (Squamata: Scincidae): An out-of-Asia diversification

BR Karin, M Metallinou, JL Weinell, TR Jackman… - Molecular phylogenetics …, 2016 - Elsevier
Despite an abundance of phylogenetic studies focused on intrageneric relationships of
members of the Mabuya group, the intergeneric relationships have remained difficult to …

Accuracy and Precision of Species Trees: Effects of Locus, Individual, and Base Pair Sampling on Inference of Species Trees in Lizards of the Liolaemus darwinii …

A Camargo, LJ Avila, M Morando… - Systematic …, 2012 - academic.oup.com
Molecular phylogenetics has entered a new era in which species trees are estimated from a
collection of gene trees using methods that accommodate their heterogeneity and …

Color polymorphism is a driver of diversification in the lizard family Lacertidae

KM Brock, EJ McTavish, DL Edwards - Systematic Biology, 2022 - academic.oup.com
Color polymorphism—two or more heritable color phenotypes maintained within a single
breeding population—is an extreme type of intraspecific diversity widespread across the tree …