The Phenix software for automated determination of macromolecular structures
X-ray crystallography is a critical tool in the study of biological systems. It is able to provide
information that has been a prerequisite to understanding the fundamentals of life. It is also a …
information that has been a prerequisite to understanding the fundamentals of life. It is also a …
Validation of protein crystal structures
GJ Kleywegt - Acta Crystallographica Section D: Biological …, 2000 - journals.iucr.org
Since the process of building and refining a model of a biomacromolecule based on
crystallographic data is subjective, quality-control techniques are required to assess the …
crystallographic data is subjective, quality-control techniques are required to assess the …
[PDF][PDF] Towards automated crystallographic structure refinement with phenix. refine
PV Afonine, RW Grosse-Kunstleve… - … Section D: Biological …, 2012 - journals.iucr.org
phenix. refine is a program within the PHENIX package that supports crystallographic
structure refinement against experimental data with a wide range of upper resolution limits …
structure refinement against experimental data with a wide range of upper resolution limits …
Crystallography & NMR system: A new software suite for macromolecular structure determination
A new software suite, called Crystallography & NMR System (CNS), has been developed for
macromolecular structure determination by X-ray crystallography or solution nuclear …
macromolecular structure determination by X-ray crystallography or solution nuclear …
[PDF][PDF] PHENIX: building new software for automated crystallographic structure determination
PD Adams, RW Grosse-Kunstleve… - … Section D: Biological …, 2002 - journals.iucr.org
Structural genomics seeks to expand rapidly the number of protein structures in order to
extract the maximum amount of information from genomic sequence databases. The advent …
extract the maximum amount of information from genomic sequence databases. The advent …
[PDF][PDF] Overview of refinement procedures within REFMAC5: utilizing data from different sources
Refinement is a process that involves bringing into agreement the structural model,
available prior knowledge and experimental data. To achieve this, the refinement procedure …
available prior knowledge and experimental data. To achieve this, the refinement procedure …
[HTML][HTML] The structural basis of estrogen receptor/coactivator recognition and the antagonism of this interaction by tamoxifen
AK Shiau, D Barstad, PM Loria, L Cheng, PJ Kushner… - Cell, 1998 - cell.com
Ligand-dependent activation of transcription by nuclear receptors (NRs) is mediated by
interactions with coactivators. Receptor agonists promote coactivator binding, and …
interactions with coactivators. Receptor agonists promote coactivator binding, and …
[HTML][HTML] Structural mechanism for rifampicin inhibition of bacterial RNA polymerase
Rifampicin (Rif) is one of the most potent and broad spectrum antibiotics against bacterial
pathogens and is a key component of anti-tuberculosis therapy, stemming from its inhibition …
pathogens and is a key component of anti-tuberculosis therapy, stemming from its inhibition …
The crystal structure of the asymmetric GroEL–GroES–(ADP)7 chaperonin complex
Z Xu, AL Horwich, PB Sigler - Nature, 1997 - nature.com
Chaperonins assist protein folding with the consumption of ATP. They exist as multi-subunit
protein assemblies comprising rings of subunits stacked back to back. In Escherichia coli …
protein assemblies comprising rings of subunits stacked back to back. In Escherichia coli …
A dynamic knockout reveals that conformational fluctuations influence the chemical step of enzyme catalysis
Conformational dynamics play a key role in enzyme catalysis. Although protein motions
have clear implications for ligand flux, a role for dynamics in the chemical step of enzyme …
have clear implications for ligand flux, a role for dynamics in the chemical step of enzyme …