Ten years of tension: single-molecule DNA mechanics

C Bustamante, Z Bryant, SB Smith - Nature, 2003 - nature.com
The basic features of DNA were elucidated during the half-century following the discovery of
the double helix. But it is only during the past decade that researchers have been able to …

Electrochemistry of nucleic acids

E Palecek, M Bartosik - Chemical Reviews, 2012 - ACS Publications
Large differences between the DPP responses of ss-and dsDNAs (Figure 4B) suggest that
the double-helical structure of the dsDNA is not significantly disturbed at the DME surface …

Etoposide promotes DNA loop trap** and barrier formation by topoisomerase II

TT Le, M Wu, JH Lee, N Bhatt, JT Inman… - Nature chemical …, 2023 - nature.com
Etoposide is a broadly employed chemotherapeutic and eukaryotic topoisomerase II poison
that stabilizes cleaved DNA intermediates to promote DNA breakage and cytotoxicity. How …

Structural transitions and elasticity from torque measurements on DNA

Z Bryant, MD Stone, J Gore, SB Smith, NR Cozzarelli… - Nature, 2003 - nature.com
Abstract Knowledge of the elastic properties of DNA is required to understand the structural
dynamics of cellular processes such as replication and transcription. Measurements of force …

Single-molecule experiments in biological physics: methods and applications

F Ritort - Journal of Physics: Condensed Matter, 2006 - iopscience.iop.org
I review single-molecule experiments (SMEs) in biological physics. Recent technological
developments have provided the tools to design and build scientific instruments of high …

[HTML][HTML] Mechanical stability of single DNA molecules

H Clausen-Schaumann, M Rief, C Tolksdorf, HE Gaub - Biophysical journal, 2000 - cell.com
Using a modified atomic force microscope (AFM), individual double-stranded (ds) DNA
molecules attached to an AFM tip and a gold surface were overstretched, and the …

Optical tweezers analysis of DNA–protein complexes

I Heller, TP Hoekstra, GA King, EJG Peterman… - Chemical …, 2014 - ACS Publications
Cellular DNA is continuously engaged in a molecular dance with many accessory proteins.
These proteins are responsible for orchestrating the storage, maintenance, and transfer of …

[HTML][HTML] Twisting and stretching single DNA molecules

T Strick, JF Allemand, V Croquette… - Progress in biophysics and …, 2000 - Elsevier
The elastic properties of DNA are essential for its biological function. They control its
bending and twisting as well as the induction of structural modifications in the molecule …

Quantifying how DNA stretches, melts and changes twist under tension

P Gross, N Laurens, LB Oddershede, U Bockelmann… - Nature Physics, 2011 - nature.com
In cells, DNA is constantly twisted, bent and stretched by numerous proteins mediating
genome transactions. Understanding these essential biological processes requires in-depth …

Grabbing the cat by the tail: manipulating molecules one by one

C Bustamante, JC Macosko, GJL Wuite - Nature Reviews Molecular …, 2000 - nature.com
Methods for manipulating single molecules are yielding new information about both the
forces that hold biomolecules together and the mechanics of molecular motors. We describe …