Gene balance hypothesis: connecting issues of dosage sensitivity across biological disciplines

JA Birchler, RA Veitia - … of the National Academy of Sciences, 2012 - National Acad Sciences
We summarize, in this review, the evidence that genomic balance influences gene
expression, quantitative traits, dosage compensation, aneuploid syndromes, population …

Bias in plant gene content following different sorts of duplication: tandem, whole-genome, segmental, or by transposition

M Freeling - Annual review of plant biology, 2009 - annualreviews.org
Each mode of gene duplication (tandem, tetraploid, segmental, transpositional) retains
genes in a biased manner. A reciprocal relationship exists between plant genes retained …

The multiple fates of gene duplications: deletion, hypofunctionalization, subfunctionalization, neofunctionalization, dosage balance constraints, and neutral variation

JA Birchler, H Yang - The Plant Cell, 2022 - academic.oup.com
Gene duplications have long been recognized as a contributor to the evolution of genes with
new functions. Multiple copies of genes can result from tandem duplication, from …

Heterosis

JA Birchler, H Yao, S Chudalayandi, D Vaiman… - The Plant …, 2010 - academic.oup.com
Heterosis refers to the phenomenon that progeny of diverse varieties of a species or crosses
between species exhibit greater biomass, speed of development, and fertility than both …

Gene copy-number alterations: a cost-benefit analysis

YC Tang, A Amon - Cell, 2013 - cell.com
Changes in DNA copy number, whether confined to specific genes or affecting whole
chromosomes, have been identified as causes of diseases and developmental …

Dosage sensitivity and the evolution of gene families in yeast

B Papp, C Pál, LD Hurst - Nature, 2003 - nature.com
According to what we term the balance hypothesis, an imbalance in the concentration of the
subcomponents of a protein–protein complex can be deleterious. If so, there are two …

Map** pathways and phenotypes by systematic gene overexpression

R Sopko, D Huang, N Preston, G Chua, B Papp… - Molecular cell, 2006 - cell.com
Many disease states result from gene overexpression, often in a specific genetic context. To
explore gene overexpression phenotypes systematically, we assembled an array of 5280 …

Exploring genetic interactions and networks with yeast

C Boone, H Bussey, BJ Andrews - Nature Reviews Genetics, 2007 - nature.com
The development and application of genetic tools and resources has enabled a partial
genetic-interaction network for the yeast Saccharomyces cerevisiae to be compiled. Analysis …

Mechanisms of haploinsufficiency revealed by genome-wide profiling in yeast

AM Deutschbauer, DF Jaramillo, M Proctor, J Kumm… - Genetics, 2005 - academic.oup.com
Haploinsufficiency is defined as a dominant phenotype in diploid organisms that are
heterozygous for a loss-of-function allele. Despite its relevance to human disease, neither …

Aneuploidy: cells losing their balance

EM Torres, BR Williams, A Amon - Genetics, 2008 - academic.oup.com
A change in chromosome number that is not the exact multiple of the haploid karyotype is
known as aneuploidy. This condition interferes with growth and development of an organism …