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Approximate Bayesian computation (ABC) in practice
Understanding the forces that influence natural variation within and among populations has
been a major objective of evolutionary biologists for decades. Motivated by the growth in …
been a major objective of evolutionary biologists for decades. Motivated by the growth in …
Approximate Bayesian computation in evolution and ecology
MA Beaumont - Annual review of ecology, evolution, and …, 2010 - annualreviews.org
In the past 10years a statistical technique, approximate Bayesian computation (ABC), has
been developed that can be used to infer parameters and choose between models in the …
been developed that can be used to infer parameters and choose between models in the …
Efficient ancestry and mutation simulation with msprime 1.0
Stochastic simulation is a key tool in population genetics, since the models involved are
often analytically intractable and simulation is usually the only way of obtaining ground-truth …
often analytically intractable and simulation is usually the only way of obtaining ground-truth …
DIYABC v2. 0: a software to make approximate Bayesian computation inferences about population history using single nucleotide polymorphism, DNA sequence and …
JM Cornuet, P Pudlo, J Veyssier, A Dehne-Garcia… - …, 2014 - academic.oup.com
Motivation: DIYABC is a software package for a comprehensive analysis of population
history using approximate Bayesian computation on DNA polymorphism data. Version 2.0 …
history using approximate Bayesian computation on DNA polymorphism data. Version 2.0 …
Approximate bayesian computation
M Sunnåker, AG Busetto, E Numminen… - PLoS computational …, 2013 - journals.plos.org
Approximate Bayesian computation (ABC) constitutes a class of computational methods
rooted in Bayesian statistics. In all model-based statistical inference, the likelihood function …
rooted in Bayesian statistics. In all model-based statistical inference, the likelihood function …
Reliable ABC model choice via random forests
Abstract Motivation: Approximate Bayesian computation (ABC) methods provide an
elaborate approach to Bayesian inference on complex models, including model choice. Both …
elaborate approach to Bayesian inference on complex models, including model choice. Both …
Approximate Bayesian computational methods
Abstract Approximate Bayesian Computation (ABC) methods, also known as likelihood-free
techniques, have appeared in the past ten years as the most satisfactory approach to …
techniques, have appeared in the past ten years as the most satisfactory approach to …
abc: an R package for approximate Bayesian computation (ABC)
Many recent statistical applications involve inference under complex models, where it is
computationally prohibitive to calculate likelihoods but possible to simulate data …
computationally prohibitive to calculate likelihoods but possible to simulate data …
Reliability of genetic bottleneck tests for detecting recent population declines
The identification of population bottlenecks is critical in conservation because populations
that have experienced significant reductions in abundance are subject to a variety of genetic …
that have experienced significant reductions in abundance are subject to a variety of genetic …
Constructing summary statistics for approximate Bayesian computation: semi-automatic approximate Bayesian computation
Many modern statistical applications involve inference for complex stochastic models, where
it is easy to simulate from the models, but impossible to calculate likelihoods. Approximate …
it is easy to simulate from the models, but impossible to calculate likelihoods. Approximate …