Enhancing deep reinforcement learning: A tutorial on generative diffusion models in network optimization

H Du, R Zhang, Y Liu, J Wang, Y Lin… - … Surveys & Tutorials, 2024 - ieeexplore.ieee.org
Generative Diffusion Models (GDMs) have emerged as a transformative force in the realm of
Generative Artificial Intelligence (GenAI), demonstrating their versatility and efficacy across …

Deep Generative Models in De Novo Drug Molecule Generation

C Pang, J Qiao, X Zeng, Q Zou… - Journal of Chemical …, 2023 - ACS Publications
The discovery of new drugs has important implications for human health. Traditional
methods for drug discovery rely on experiments to optimize the structure of lead molecules …

Generative diffusion models on graphs: Methods and applications

C Liu, W Fan, Y Liu, J Li, H Li, H Liu, J Tang… - arxiv preprint arxiv …, 2023 - arxiv.org
Diffusion models, as a novel generative paradigm, have achieved remarkable success in
various image generation tasks such as image inpainting, image-to-text translation, and …

A dual diffusion model enables 3D molecule generation and lead optimization based on target pockets

L Huang, T Xu, Y Yu, P Zhao, X Chen, J Han… - Nature …, 2024 - nature.com
Abstract Structure-based generative chemistry is essential in computer-aided drug discovery
by exploring a vast chemical space to design ligands with high binding affinity for targets …

Generative AI and process systems engineering: The next frontier

B Decardi-Nelson, AS Alshehri, A Ajagekar… - Computers & Chemical …, 2024 - Elsevier
This review article explores how emerging generative artificial intelligence (GenAI) models,
such as large language models (LLMs), can enhance solution methodologies within process …

Mudiff: Unified diffusion for complete molecule generation

C Hua, S Luan, M Xu, Z Ying, J Fu… - Learning on Graphs …, 2024 - proceedings.mlr.press
Molecule generation is a very important practical problem, with uses in drug discovery and
material design, and AI methods promise to provide useful solutions. However, existing …

A survey on graph diffusion models: Generative ai in science for molecule, protein and material

M Zhang, M Qamar, T Kang, Y Jung, C Zhang… - arxiv preprint arxiv …, 2023 - arxiv.org
Diffusion models have become a new SOTA generative modeling method in various fields,
for which there are multiple survey works that provide an overall survey. With the number of …

Denoising diffusion recommender model

J Zhao, W Wenjie, Y Xu, T Sun, F Feng… - Proceedings of the 47th …, 2024 - dl.acm.org
Recommender systems often grapple with noisy implicit feedback. Most studies alleviate the
noise issues from data cleaning perspective such as data resampling and reweighting, but …

Diffusion models in de novo drug design

A Alakhdar, B Poczos, N Washburn - Journal of Chemical …, 2024 - ACS Publications
Diffusion models have emerged as powerful tools for molecular generation, particularly in
the context of 3D molecular structures. Inspired by nonequilibrium statistical physics, these …

Midi: Mixed graph and 3d denoising diffusion for molecule generation

C Vignac, N Osman, L Toni, P Frossard - Joint European Conference on …, 2023 - Springer
This work introduces MiDi, a novel diffusion model for jointly generating molecular graphs
and their corresponding 3D atom arrangements. Unlike existing methods that rely on …