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An end-to-end deep learning method for protein side-chain packing and inverse folding
M McPartlon, J Xu - Proceedings of the National Academy of Sciences, 2023 - pnas.org
Protein side-chain packing (PSCP), the task of determining amino acid side-chain
conformations given only backbone atom positions, has important applications to protein …
conformations given only backbone atom positions, has important applications to protein …
Understanding and controlling food protein structure and function in foods: perspectives from experiments and computer simulations
The structure and interactions of proteins play a critical role in determining the quality
attributes of many foods, beverages, and pharmaceutical products. Incorporating a …
attributes of many foods, beverages, and pharmaceutical products. Incorporating a …
Nanoparticle transport phenomena in confined flows
Nanoparticles submerged in confined flow fields occur in several technological applications
involving heat and mass transfer in nanoscale systems. Describing the transport with …
involving heat and mass transfer in nanoscale systems. Describing the transport with …
[HTML][HTML] Role of force fields in protein function prediction
The world today, although, has developed an elaborate health system to fortify against
known and unknown diseases, it continues to be challenged by new as well as emerging …
known and unknown diseases, it continues to be challenged by new as well as emerging …
An end-to-end deep learning method for rotamer-free protein side-chain packing
M McPartlon, J Xu - bioRxiv, 2022 - biorxiv.org
Protein side-chain packing (PSCP), the task of determining amino acid side-chain
conformations, has important applications to protein structure prediction, refinement, and …
conformations, has important applications to protein structure prediction, refinement, and …
Fragment-Based Protein Structure Prediction, Where Are We Now?
In the past decade, there has been an extensive advancement in the creation of methods for
the design and prediction of protein structures. Expeditious growth in protein structure and …
the design and prediction of protein structures. Expeditious growth in protein structure and …
[PDF][PDF] Correlation analysis of European Sea Bass (Dicentrarchus labrax) Growth Hormone (GH) Gene and Growth Traits
The growth hormone (GH) gene has important regulatory roles in postnatal somatic growth,
metabolism and development of vertebrates and sh. The aim of this study was to identify the …
metabolism and development of vertebrates and sh. The aim of this study was to identify the …
Normal Mode Analysis: A Tool for Better Understanding Protein
JA Bauer, V Bauerová-Hlinková - Homology Molecular Modeling …, 2021 - books.google.com
Molecular dynamics (MD) and normal mode analysis (NMA) are very useful methods for
characterizing various dynamic aspects of biological macromolecules. In comparison to MD …
characterizing various dynamic aspects of biological macromolecules. In comparison to MD …
[PDF][PDF] Understanding and Controlling Food Protein Folding and Aggregation and taste: perspectives from experiment and simulation
Molecular mechanisms play key roles at a fundamental and processing level, in innovative
taste systems, functional and nutritional ingredients, and integrated solutions for the food …
taste systems, functional and nutritional ingredients, and integrated solutions for the food …