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[HTML][HTML] A practical guide to small angle X-ray scattering (SAXS) of flexible and intrinsically disordered proteins
AG Kikhney, DI Svergun - FEBS letters, 2015 - Elsevier
Small-angle X-ray scattering (SAXS) is a biophysical method to study the overall shape and
structural transitions of biological macromolecules in solution. SAXS provides low resolution …
structural transitions of biological macromolecules in solution. SAXS provides low resolution …
Polyproline-II helix in proteins: structure and function
The poly-l-proline type II (PPII) helix in recent years has emerged clearly as a structural class
not only of fibrillar proteins (in collagen, PPII is a dominant conformation) but also of the …
not only of fibrillar proteins (in collagen, PPII is a dominant conformation) but also of the …
Advanced ensemble modelling of flexible macromolecules using X-ray solution scattering
Dynamic ensembles of macromolecules mediate essential processes in biology.
Understanding the mechanisms driving the function and molecular interactions …
Understanding the mechanisms driving the function and molecular interactions …
Single-molecule FRET spectroscopy and the polymer physics of unfolded and intrinsically disordered proteins
The properties of unfolded proteins have long been of interest because of their importance
to the protein folding process. Recently, the surprising prevalence of unstructured regions or …
to the protein folding process. Recently, the surprising prevalence of unstructured regions or …
DeerLab: A comprehensive toolbox for analyzing dipolar EPR spectroscopy data
L Fábregas Ibáñez, G Jeschke… - Magnetic Resonance …, 2020 - mr.copernicus.org
Dipolar EPR spectroscopy (DEER and other techniques) enables the structural
characterization of macromolecular and biological systems by measurement of distance …
characterization of macromolecular and biological systems by measurement of distance …
A review of methods available to estimate solvent-accessible surface areas of soluble proteins in the folded and unfolded states
Solvent accessible surface area (SASA) of proteins has always been considered as a
decisive factor in protein folding and stability studies. It is defined as the surface …
decisive factor in protein folding and stability studies. It is defined as the surface …
Polymer scaling laws of unfolded and intrinsically disordered proteins quantified with single-molecule spectroscopy
The dimensions of unfolded and intrinsically disordered proteins are highly dependent on
their amino acid composition and solution conditions, especially salt and denaturant …
their amino acid composition and solution conditions, especially salt and denaturant …
Intrinsically disordered regions that drive phase separation form a robustly distinct protein class
AI Ibrahim, N Khaodeuanepheng, D Amarasekara… - Biophysical …, 2023 - cell.com
Liquid-liquid phase separation (LLPS) of proteins is thought to be a primary driving force for
the formation of membraneless organelles, which control a wide range of biological …
the formation of membraneless organelles, which control a wide range of biological …
Random-coil behavior and the dimensions of chemically unfolded proteins
JE Kohn, IS Millett, J Jacob, B Zagrovic… - Proceedings of the …, 2004 - pnas.org
Spectroscopic studies have identified a number of proteins that appear to retain significant
residual structure under even strongly denaturing conditions. Intrinsic viscosity …
residual structure under even strongly denaturing conditions. Intrinsic viscosity …
Global hairpin folding of tau in solution
S Jeganathan, M von Bergen, H Brutlach… - Biochemistry, 2006 - ACS Publications
The microtubule-associated protein tau stabilizes microtubules in its physiological role,
whereas it forms insoluble aggregates (paired helical filaments) in Alzheimer's disease …
whereas it forms insoluble aggregates (paired helical filaments) in Alzheimer's disease …