piRNA Biogenesis in Drosophila melanogaster

X Huang, KF Tóth, AA Aravin - Trends in Genetics, 2017 - cell.com
The PIWI-interacting RNA (piRNA) pathway is a conserved defense system that protects the
genome integrity of the animal germline from deleterious transposable elements. Targets of …

PIWI-Interacting RNA in Drosophila: Biogenesis, Transposon Regulation, and Beyond

H Yamashiro, MC Siomi - Chemical reviews, 2017 - ACS Publications
PIWI-interacting RNAs (piRNAs) are germline-enriched small RNAs that control transposons
to maintain genome integrity. To achieve this, upon being processed from piRNA precursors …

The Drosophila ZAD zinc finger protein Kipferl guides Rhino to piRNA clusters

L Baumgartner, D Handler, SW Platzer, C Yu… - Elife, 2022 - elifesciences.org
RNA interference systems depend on the synthesis of small RNA precursors whose
sequences define the target spectrum of these silencing pathways. The Drosophila …

Cutoff suppresses RNA polymerase II termination to ensure expression of piRNA precursors

YCA Chen, E Stuwe, Y Luo, M Ninova, A Le Thomas… - Molecular cell, 2016 - cell.com
Small non-coding RNAs called piRNAs serve as guides for an adaptable immune system
that represses transposable elements in germ cells of Metazoa. In Drosophila the RDC …

Establishment and evolution of heterochromatin

J Liu, M Ali, Q Zhou - Annals of the New York Academy of …, 2020 - Wiley Online Library
The eukaryotic genome is packaged into transcriptionally active euchromatin and silent
heterochromatin, with most studies focused on the former encompassing the majority of …

Splicing-independent loading of TREX on nascent RNA is required for efficient expression of dual-strand piRNA clusters in Drosophila

JK Hur, Y Luo, S Moon, M Ninova… - Genes & …, 2016 - genesdev.cshlp.org
The conserved THO/TREX (transcription/export) complex is critical for pre-mRNA processing
and mRNA nuclear export. In metazoa, TREX is loaded on nascent RNA transcribed by RNA …

Adaptive evolution leads to cross-species incompatibility in the piRNA transposon silencing machinery

SS Parhad, S Tu, Z Weng, WE Theurkauf - Developmental Cell, 2017 - cell.com
Reproductive isolation defines species divergence and is linked to adaptive evolution of
hybrid incompatibility genes. Hybrids between Drosophila melanogaster and Drosophila …

[HTML][HTML] Structure and organization of chromatin fiber in the nucleus

G Li, P Zhu - FEBS letters, 2015 - Elsevier
Eukaryotic genomes are organized hierarchically into chromatin structures by histones.
Despite extensive research for over 30 years, not only the fundamental structure of the 30 …

Maternally inherited siRNAs initiate piRNA cluster formation

Y Luo, P He, N Kanrar, KF Toth, AA Aravin - Molecular cell, 2023 - cell.com
PIWI-interacting RNAs (piRNAs) guide transposable element repression in animal germ
lines. In Drosophila, piRNAs are produced from heterochromatic loci, called piRNA clusters …

Maelstrom represses canonical polymerase II transcription within bi-directional piRNA clusters in Drosophila melanogaster

TH Chang, E Mattei, I Gainetdinov, C Colpan, Z Weng… - Molecular cell, 2019 - cell.com
Summary In Drosophila, 23–30 nt long PIWI-interacting RNAs (piRNAs) direct the protein
Piwi to silence germline transposon transcription. Most germline piRNAs derive from dual …