Applications in the search for genomic selection signatures in fish

ME López, R Neira, JM Yáñez - Frontiers in genetics, 2015 - frontiersin.org
Selection signatures are genomic regions harboring DNA sequences functionally involved
in the genetic variation of traits subject to selection. Selection signatures have been …

Population genomics of the honey bee reveals strong signatures of positive selection on worker traits

BA Harpur, CF Kent, D Molodtsova, JMD Lebon… - Proceedings of the …, 2014 - pnas.org
Most theories used to explain the evolution of eusociality rest upon two key assumptions:
mutations affecting the phenotype of sterile workers evolve by positive selection if the …

Map** signatures of positive selection in the genome of livestock

S Qanbari, H Simianer - Livestock science, 2014 - Elsevier
Human driven selection during domestication and subsequent breed formation and
breeding has left detectable signatures within the genome of livestock breeds. The …

Genomic signatures reveal new evidences for selection of important traits in domestic cattle

L Xu, DM Bickhart, JB Cole… - Molecular biology …, 2015 - academic.oup.com
We investigated diverse genomic selections using high-density single nucleotide
polymorphism data of five distinct cattle breeds. Based on allele frequency differences, we …

[HTML][HTML] South African indigenous chickens' genetic diversity, and the adoption of ecological niche modelling and landscape genomics as strategic conservation …

RR Mogano, TJ Mpofu, B Mtileni, K Hadebe - Poultry Science, 2024 - Elsevier
Selection pressures found in the prevailing production environments have shaped the
genetic structure of indigenous chickens we see today. Indigenous chickens, raised in …

Dissecting selective signatures and candidate genes in grandparent lines subject to high selection pressure for broiler production and in a local Russian chicken …

MN Romanov, AV Shakhin, AS Abdelmanova… - Genes, 2024 - mdpi.com
Breeding improvements and quantitative trait genetics are essential to the advancement of
broiler production. The impact of artificial selection on genomic architecture and the genetic …

Detecting recent selective sweeps while controlling for mutation rate and background selection

CD Huber, M DeGiorgio, I Hellmann… - Molecular …, 2016 - Wiley Online Library
A composite likelihood ratio test implemented in the program sweepfinder is a commonly
used method for scanning a genome for recent selective sweeps. sweepfinder uses …

Efficiency of different strategies to mitigate ascertainment bias when using SNP panels in diversity studies

DK Malomane, C Reimer, S Weigend, A Weigend… - Bmc Genomics, 2018 - Springer
Background Single nucleotide polymorphism (SNP) panels have been widely used to study
genomic variations within and between populations. Methods of SNP discovery have been a …

[HTML][HTML] Unveiling comparative genomic trajectories of selection and key candidate genes in egg-type Russian White and meat-type White Cornish chickens

AS Abdelmanova, AV Dotsev, MN Romanov… - Biology, 2021 - mdpi.com
Simple Summary The search for genomic regions of putative selective signaling is
instrumental in obtaining information about selection history in various species and …