A survey of BWT variants for string collections

D Cenzato, Z Lipták - Bioinformatics, 2024 - academic.oup.com
Motivation In recent years, the focus of bioinformatics research has moved from individual
sequences to collections of sequences. Given the fundamental role of the Burrows-Wheeler …

r-indexing the eBWT

C Boucher, D Cenzato, Z Lipták, M Rossi… - Information and …, 2024 - Elsevier
Abstract The extended Burrows-Wheeler Transform (eBWT) was introduced by Mantaci et
al.[TCS 2007] to extend the definition of the BWT to a collection of strings. As opposed to …

A survey of BWT variants for string collections

D Cenzato, Z Lipták - ar** and classification of Next-Generation Sequencing data
K Brinda - 2016 - hal.science
Since their emergence around 2006, Next-Generation Sequencing technologies have been
revolutionizing biological and medical research. Obtaining instantly an extensive amount of …