Reprogramming the genetic code

D de la Torre, JW Chin - Nature Reviews Genetics, 2021 - nature.com
The encoded biosynthesis of proteins provides the ultimate paradigm for high-fidelity
synthesis of long polymers of defined sequence and composition, but it is limited to …

Deciphering protein post-translational modifications using chemical biology tools

AC Conibear - Nature Reviews Chemistry, 2020 - nature.com
Proteins carry out a wide variety of catalytic, regulatory, signalling and structural functions in
living systems. Following their assembly on ribosomes and throughout their lifetimes, most …

Cracking the code: reprogramming the genetic script in prokaryotes and eukaryotes to harness the power of noncanonical amino acids

C Jann, S Giofré, R Bhattacharjee, EA Lemke - Chemical Reviews, 2024 - ACS Publications
Over 500 natural and synthetic amino acids have been genetically encoded in the last two
decades. Incorporating these noncanonical amino acids into proteins enables many …

Engineering pyrrolysine systems for genetic code expansion and reprogramming

DL Dunkelmann, JW Chin - Chemical Reviews, 2024 - ACS Publications
Over the past 16 years, genetic code expansion and reprogramming in living organisms has
been transformed by advances that leverage the unique properties of pyrrolysyl-tRNA …

A new dawn beyond lysine ubiquitination

DR Squair, S Virdee - Nature Chemical Biology, 2022 - nature.com
The ubiquitin system has become synonymous with the modification of lysine residues.
However, the substrate scope and diversity of the conjugation machinery have been …

Challenges in the use of sortase and other peptide ligases for site-specific protein modification

HE Morgan, WB Turnbull, ME Webb - Chemical Society Reviews, 2022 - pubs.rsc.org
Site-specific protein modification is a widely-used biochemical tool. However, there are
many challenges associated with the development of protein modification techniques, in …

Chemoenzymatic semisynthesis of proteins

RE Thompson, TW Muir - Chemical reviews, 2019 - ACS Publications
Protein semisynthesis—defined herein as the assembly of a protein from a combination of
synthetic and recombinant fragments—is a burgeoning field of chemical biology that has …

Chemical synthesis of human proteoforms and application in biomedicine

H Ai, M Pan, L Liu - ACS Central Science, 2024 - ACS Publications
Limited understanding of human proteoforms with complex posttranslational modifications
and the underlying mechanisms poses a major obstacle to research on human health and …

Uncovering post-translational modification-associated protein–protein interactions

S Wang, AO Osgood, A Chatterjee - Current opinion in structural biology, 2022 - Elsevier
In living systems, the chemical space and functional repertoire of proteins are dramatically
expanded through the post-translational modification (PTM) of various amino acid residues …

Synthetic E2-Ub-nucleosome conjugates for studying nucleosome ubiquitination

H Ai, Z Tong, Z Deng, J Tian, L Zhang, M Sun, Y Du… - Chem, 2023 - cell.com
Summary E2-ubiquitin (Ub) conjugates are useful chemical biology tools for studying the E3
mechanisms, but so far, the reported systems have involved either no substrates or only …