Mechanisms of polycomb gene silencing: knowns and unknowns

JA Simon, RE Kingston - Nature reviews Molecular cell biology, 2009 - nature.com
Polycomb proteins form chromatin-modifying complexes that implement transcriptional
silencing in higher eukaryotes. Hundreds of genes are silenced by Polycomb proteins …

Genome regulation by polycomb and trithorax proteins

B Schuettengruber, D Chourrout, M Vervoort… - Cell, 2007 - cell.com
Polycomb group (PcG) and trithorax group (trxG) proteins are critical regulators of numerous
developmental genes. To silence or activate gene expression, respectively, PcG and trxG …

Enhancer loops appear stable during development and are associated with paused polymerase

Y Ghavi-Helm, FA Klein, T Pakozdi, L Ciglar… - Nature, 2014 - nature.com
Developmental enhancers initiate transcription and are fundamental to our understanding of
developmental networks, evolution and disease. Despite their importance, the properties …

Ring1B compacts chromatin structure and represses gene expression independent of histone ubiquitination

R Eskeland, M Leeb, GR Grimes, C Kress, S Boyle… - Molecular cell, 2010 - cell.com
How polycomb group proteins repress gene expression in vivo is not known. While histone-
modifying activities of the polycomb repressive complexes (PRCs) have been studied …

Functional implications of genome topology

G Cavalli, T Misteli - Nature structural & molecular biology, 2013 - nature.com
Although genomes are defined by their sequence, the linear arrangement of nucleotides is
only their most basic feature. A fundamental property of genomes is their topological …

Nucleosome destabilization in the epigenetic regulation of gene expression

S Henikoff - Nature Reviews Genetics, 2008 - nature.com
Assembly, mobilization and disassembly of nucleosomes can influence the regulation of
gene expression and other processes that act on eukaryotic DNA. Distinct nucleosome …

Polycomb/Trithorax response elements and epigenetic memory of cell identity

L Ringrose, R Paro - 2007 - journals.biologists.com
Polycomb/Trithorax group response elements (PRE/TREs) are fascinating chromosomal
pieces. Just a few hundred base pairs long, these elements can remember and maintain the …

Genomic evolution of Hox gene clusters

D Lemons, W McGinnis - Science, 2006 - science.org
The family of Hox genes, which number 4 to 48 per genome depending on the animal,
control morphologies on the main body axis of nearly all metazoans. The conventional …

Chromatin loops in gene regulation

S Kadauke, GA Blobel - Biochimica et Biophysica Acta (BBA)-Gene …, 2009 - Elsevier
The control of gene expression involves regulatory elements that can be very far from the
genes they control. Several recent technological advances have allowed the direct detection …

Polycomb response elements mediate the formation of chromosome higher-order structures in the bithorax complex

C Lanzuolo, V Roure, J Dekker, F Bantignies… - Nature cell …, 2007 - nature.com
In Drosophila, the function of the Polycomb group genes (PcGs) and their target sequences
(Polycomb response elements (PREs)) is to convey mitotic heritability of transcription …