Targeting transcription factors for cancer treatment

M Lambert, S Jambon, S Depauw… - Molecules, 2018 - mdpi.com
Transcription factors are involved in a large number of human diseases such as cancers for
which they account for about 20% of all oncogenes identified so far. For long time, with the …

[HTML][HTML] Structure and mechanism of the RNA polymerase II transcription machinery

AC Schier, DJ Taatjes - Genes & development, 2020 - genesdev.cshlp.org
Abstract RNA polymerase II (Pol II) transcribes all protein-coding genes and many
noncoding RNAs in eukaryotic genomes. Although Pol II is a complex, 12-subunit enzyme, it …

Structural insights into preinitiation complex assembly on core promoters

X Chen, Y Qi, Z Wu, X Wang, J Li, D Zhao, H Hou, Y Li… - Science, 2021 - science.org
INTRODUCTION RNA polymerase II (Pol II)–mediated transcription initiation requires
assembly of a preinitiation complex (PIC), during which the 14-subunit transcription factor IID …

Nucleosome structure and function

RK McGinty, S Tan - Chemical reviews, 2015 - ACS Publications
When fully extended, one copy of the three billion base pair human genome reaches a
length of over two meters. Yet, it must be packaged into the nucleus of a cell with an average …

Structural basis of transcription initiation by RNA polymerase II

S Sainsbury, C Bernecky, P Cramer - Nature reviews Molecular cell …, 2015 - nature.com
Transcription of eukaryotic protein-coding genes commences with the assembly of a
conserved initiation complex, which consists of RNA polymerase II (Pol II) and the general …

[ΒΙΒΛΙΟ][B] Principles of nucleic acid structure

S Neidle, M Sanderson - 2021 - books.google.com
Principles of Nucleic Acid Structure, Second Edition, provides the most complete and
concise summary of underlying principles and approaches to studying nucleic acid structure …

The role of DNA shape in protein–DNA recognition

R Rohs, SM West, A Sosinsky, P Liu, RS Mann… - Nature, 2009 - nature.com
The recognition of specific DNA sequences by proteins is thought to depend on two types of
mechanism: one that involves the formation of hydrogen bonds with specific bases, primarily …

Xanthomonas AvrBs3 Family-Type III Effectors: Discovery and Function

J Boch, U Bonas - Annual review of phytopathology, 2010 - annualreviews.org
Xanthomonads are bacterial plant pathogens that cause diseases on many plant species,
including important crops. Key to pathogenicity of most Xanthomonas pathovars is a Hrp …

Origins of specificity in protein-DNA recognition

R Rohs, X **, SM West, R Joshi… - Annual review of …, 2010 - annualreviews.org
Specific interactions between proteins and DNA are fundamental to many biological
processes. In this review, we provide a revised view of protein-DNA interactions that …

3DNA: a software package for the analysis, rebuilding and visualization of three‐dimensional nucleic acid structures

XJ Lu, WK Olson - Nucleic acids research, 2003 - academic.oup.com
We present a comprehensive software package, 3DNA, for the analysis, reconstruction and
visualization of three‐dimensional nucleic acid structures. Starting from a coordinate file in …