Fluorescence resonance energy transfer at the single-molecule level

T Ha, J Fei, S Schmid, NK Lee… - Nature Reviews …, 2024 - nature.com
Fluorescence resonance energy transfer (FRET) is a powerful spectroscopic method for
measuring distances in the 2–8 nm range. Often, conformational changes and molecular …

Interaction dynamics of intrinsically disordered proteins from single-molecule spectroscopy

A Chowdhury, D Nettels… - Annual review of …, 2023 - annualreviews.org
Many proteins contain large structurally disordered regions or are entirely disordered under
physiological conditions. The functions of these intrinsically disordered proteins (IDPs) often …

Reliability and accuracy of single-molecule FRET studies for characterization of structural dynamics and distances in proteins

G Agam, C Gebhardt, M Popara, R Mächtel, J Folz… - Nature …, 2023 - nature.com
Single-molecule Förster-resonance energy transfer (smFRET) experiments allow the study
of biomolecular structure and dynamics in vitro and in vivo. We performed an international …

Precision and accuracy of single-molecule FRET measurements—a multi-laboratory benchmark study

B Hellenkamp, S Schmid, O Doroshenko… - Nature …, 2018 - nature.com
Single-molecule Förster resonance energy transfer (smFRET) is increasingly being used to
determine distances, structures, and dynamics of biomolecules in vitro and in vivo. However …

Fluorescence lifetime measurements and biological imaging

MY Berezin, S Achilefu - Chemical reviews, 2010 - ACS Publications
When a molecule absorbs a photon of appropriate energy, a chain of photophysical events
ensues, such as internal conversion or vibrational relaxation (loss of energy in the absence …

Conformational activation promotes CRISPR-Cas12a catalysis and resetting of the endonuclease activity

S Stella, P Mesa, J Thomsen, B Paul, P Alcón… - Cell, 2018 - cell.com
Cas12a, also known as Cpf1, is a type VA CRISPR-Cas RNA-guided endonuclease that is
used for genome editing based on its ability to generate specific dsDNA breaks. Here, we …

The cytoplasmic synthesis and coupled membrane translocation of eukaryotic polyphosphate by signal-activated VTC complex

Z Guan, J Chen, R Liu, Y Chen, Q **ng, Z Du… - Nature …, 2023 - nature.com
Inorganic polyphosphate (polyP) is an ancient energy metabolite and phosphate store that
occurs ubiquitously in all organisms. The vacuolar transporter chaperone (VTC) complex …

Advances in single-molecule fluorescence methods for molecular biology

C Joo, H Balci, Y Ishitsuka, C Buranachai… - Annu. Rev …, 2008 - annualreviews.org
Ever since their introduction two decades ago, single-molecule (SM) fluorescence methods
have matured and branched out to address numerous biological questions, which were …

Protein folding studied by single-molecule FRET

B Schuler, WA Eaton - Current opinion in structural biology, 2008 - Elsevier
A complete understanding of a protein-folding mechanism requires description of the
distribution of microscopic pathways that connect the folded and unfolded states. This …

Pulsed interleaved excitation

BK Müller, E Zaychikov, C Bräuchle, DC Lamb - Biophysical journal, 2005 - cell.com
In this article, we demonstrate the new method of pulsed interleaved excitation (PIE), which
can be used to extend the capabilities of multiple-color fluorescence imaging, fluorescence …