Top 10 plant‐parasitic nematodes in molecular plant pathology
The aim of this review was to undertake a survey of researchers working with plant‐parasitic
nematodes in order to determine a 'top 10'list of these pathogens based on scientific and …
nematodes in order to determine a 'top 10'list of these pathogens based on scientific and …
Twenty years of plant genome sequencing: achievements and challenges
Y Sun, L Shang, QH Zhu, L Fan, L Guo - Trends in Plant Science, 2022 - cell.com
Publication of the complete genome sequence of Arabidopsis thaliana, the first plant
reference genome, in December 2000 heralded the beginning of the plant genome era …
reference genome, in December 2000 heralded the beginning of the plant genome era …
One thousand plant transcriptomes and the phylogenomics of green plants
Nature, 2019 - nature.com
Green plants (Viridiplantae) include around 450,000–500,000 species, of great diversity and
have important roles in terrestrial and aquatic ecosystems. Here, as part of the One …
have important roles in terrestrial and aquatic ecosystems. Here, as part of the One …
XSEDE: accelerating scientific discovery
Computing in science and engineering is now ubiquitous: digital technologies underpin,
accelerate, and enable new, even transformational, research in all domains. Access to an …
accelerate, and enable new, even transformational, research in all domains. Access to an …
Dual domestications and origin of traits in grapevine evolution
We elucidate grapevine evolution and domestication histories with 3525 cultivated and wild
accessions worldwide. In the Pleistocene, harsh climate drove the separation of wild grape …
accessions worldwide. In the Pleistocene, harsh climate drove the separation of wild grape …
Phased diploid genome assembly with single-molecule real-time sequencing
While genome assembly projects have been successful in many haploid and inbred
species, the assembly of noninbred or rearranged heterozygous genomes remains a major …
species, the assembly of noninbred or rearranged heterozygous genomes remains a major …
MCScanX: a toolkit for detection and evolutionary analysis of gene synteny and collinearity
MCScan is an algorithm able to scan multiple genomes or subgenomes in order to identify
putative homologous chromosomal regions, and align these regions using genes as …
putative homologous chromosomal regions, and align these regions using genes as …
[HTML][HTML] The tomato genome sequence provides insights into fleshy fruit evolution
xx Tomato Genome Consortium - Nature, 2012 - ncbi.nlm.nih.gov
AUTHOR CONTRIBUTIONS AAL, ABA, ABE, ABG, ABO, AFI, AGR, AHA, AHU, AJA, AJM,
AJO, AKM, AKS, AKT, AMO, APA, ARI, ASI, ATR, AUS, AVE, BAR, BAW, BCK, BCM, BDK …
AJO, AKM, AKS, AKT, AMO, APA, ARI, ASI, ATR, AUS, AVE, BAR, BAW, BCK, BCM, BDK …
Circos: an information aesthetic for comparative genomics
We created a visualization tool called Circos to facilitate the identification and analysis of
similarities and differences arising from comparisons of genomes. Our tool is effective in …
similarities and differences arising from comparisons of genomes. Our tool is effective in …
Phytozome: a comparative platform for green plant genomics
DM Goodstein, S Shu, R Howson… - Nucleic acids …, 2012 - academic.oup.com
The number of sequenced plant genomes and associated genomic resources is growing
rapidly with the advent of both an increased focus on plant genomics from funding agencies …
rapidly with the advent of both an increased focus on plant genomics from funding agencies …