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A survey on subgraph counting: concepts, algorithms, and applications to network motifs and graphlets
Computing subgraph frequencies is a fundamental task that lies at the core of several
network analysis methodologies, such as network motifs and graphlet-based metrics, which …
network analysis methodologies, such as network motifs and graphlet-based metrics, which …
Network alignment
Complex networks are frequently employed to model physical or virtual complex systems.
When certain entities exist across multiple systems simultaneously, unveiling their …
When certain entities exist across multiple systems simultaneously, unveiling their …
[PDF][PDF] Current and future directions in network biology
Network biology is an interdisciplinary field bridging computational and biological sciences
that has proved pivotal in advancing the understanding of cellular functions and diseases …
that has proved pivotal in advancing the understanding of cellular functions and diseases …
Network alignment and motif discovery in dynamic networks
In the-omics era, bioinformatics technologies allowed the development of several
approaches useful to analyze biological systems. To provide a deep insight into a biological …
approaches useful to analyze biological systems. To provide a deep insight into a biological …
[HTML][HTML] Multilayer biological network alignment based on similarity computation via graph neural networks
P Cinaglia - Journal of Computational Science, 2024 - Elsevier
Multilayer networks prove highly effective in scenarios where objects of different entities
require a heterogeneity of types of interaction. Briefly, a multilayer network consists of nodes …
require a heterogeneity of types of interaction. Briefly, a multilayer network consists of nodes …
Temporal networks in biology and medicine: a survey on models, algorithms, and tools
The use of static graphs for modelling and analysis of biological and biomedical data plays a
key role in biomedical research. However, many real-world scenarios present dynamic …
key role in biomedical research. However, many real-world scenarios present dynamic …
Aligning dynamic social networks: An optimization over dynamic graph autoencoder
Social network alignment, aligning different social networks on their common users, is
receiving increasing attention from both academic and industry. Most of the existing studies …
receiving increasing attention from both academic and industry. Most of the existing studies …
Heuristics and metaheuristics for biological network alignment: A review
In recent years, with the emergence of big-data and high-throughput biological analyses,
massive biological data have been generated and accessed, and many heuristic and …
massive biological data have been generated and accessed, and many heuristic and …
DNA: Dynamic social network alignment
Social network alignment, aligning different social networks on their common users, is
receiving dramatic attention from both academic and industry. All existing studies consider …
receiving dramatic attention from both academic and industry. All existing studies consider …
Cross-temporal snapshot alignment for dynamic networks
In this paper, we study the task of cross-temporal snapshot alignment for dynamic networks.
The goal of this task is to match equivalent nodes across temporal snapshots of a given …
The goal of this task is to match equivalent nodes across temporal snapshots of a given …