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Intrinsically disordered regions are poised to act as sensors of cellular chemistry
Intrinsically disordered proteins and protein regions (IDRs) are abundant in eukaryotic
proteomes and play a wide variety of essential roles. Instead of folding into a stable …
proteomes and play a wide variety of essential roles. Instead of folding into a stable …
Molecular simulations integrated with experiments for probing the interaction dynamics and binding mechanisms of intrinsically disordered proteins
Intrinsically disordered proteins (IDPs) exploit their plasticity to deploy a rich panoply of soft
interactions and binding phenomena. Advances in tailoring molecular simulations for IDPs …
interactions and binding phenomena. Advances in tailoring molecular simulations for IDPs …
Tuning the viscoelastic properties of peptide coacervates by single amino acid mutations and salt kosmotropicity
Coacervation, or liquid-liquid phase separation (LLPS) of biomacromolecules, is
increasingly recognized to play an important role both intracellularly and in the extracellular …
increasingly recognized to play an important role both intracellularly and in the extracellular …
A coarse‐grained model for disordered and multi‐domain proteins
Many proteins contain more than one folded domain, and such modular multi‐domain
proteins help expand the functional repertoire of proteins. Because of their larger size and …
proteins help expand the functional repertoire of proteins. Because of their larger size and …
SOP-MULTI: A Self-Organized Polymer-Based Coarse-Grained Model for Multidomain and Intrinsically Disordered Proteins with Conformation Ensemble Consistent …
Multidomain proteins with long flexible linkers and full-length intrinsically disordered
proteins (IDPs) are best defined as an ensemble of conformations rather than a single …
proteins (IDPs) are best defined as an ensemble of conformations rather than a single …
Complete diagram of conformational regimes for polyampholytic disordered proteins
Conformations of polyampholytic intrinsically disordered proteins (IDPs) are controlled by
the interplay between Coulomb attractions of the opposite charges and long-range Coulomb …
the interplay between Coulomb attractions of the opposite charges and long-range Coulomb …
Ion Mobility mass spectrometry unveils global protein conformations in response to conditions that promote and reverse liquid–liquid phase separation
Liquid–liquid phase separation (LLPS) is a process by which biomacromolecules,
particularly proteins, condense into a dense phase that resembles liquid droplets …
particularly proteins, condense into a dense phase that resembles liquid droplets …
How hydrophobicity, side chains, and salt affect the dimensions of disordered proteins
Despite the generally accepted role of the hydrophobic effect as the driving force for folding,
many intrinsically disordered proteins (IDPs), including those with hydrophobic content …
many intrinsically disordered proteins (IDPs), including those with hydrophobic content …
Live-cell imaging to resolve salt-induced liquid–liquid phase separation of FUS protein by dye self-labeling
Y Zhang, N Xu, C Yan, X Zhou, Q Qiao… - … & Biomedical Imaging, 2023 - ACS Publications
The aggregation of fusion in sarcoma (FUS) in the cytoplasm and nucleus is a pathological
feature of Amyotrophic lateral sclerosis (ALS) and Frontotemporal Dementia (FTD). Genetic …
feature of Amyotrophic lateral sclerosis (ALS) and Frontotemporal Dementia (FTD). Genetic …
A Coarse-Grained SPICA Makeover for Solvated and Bare Sodium and Chloride Ions
Aqueous ionic solutions are pivotal in various scientific domains due to their natural
prevalence and vital roles in biological and chemical processes. Molecular dynamics has …
prevalence and vital roles in biological and chemical processes. Molecular dynamics has …