Implementing vertex dynamics models of cell populations in biology within a consistent computational framework
The dynamic behaviour of epithelial cell sheets plays a central role during development,
growth, disease and wound healing. These processes occur as a result of cell adhesion …
growth, disease and wound healing. These processes occur as a result of cell adhesion …
Three-dimensional cardiac computational modelling: methods, features and applications
The combination of computational models and biophysical simulations can help to interpret
an array of experimental data and contribute to the understanding, diagnosis and treatment …
an array of experimental data and contribute to the understanding, diagnosis and treatment …
[KİTAP][B] The mathematics and mechanics of biological growth
A Goriely - 2017 - books.google.com
This monograph presents a general mathematical theory for biological growth. It provides
both a conceptual and a technical foundation for the understanding and analysis of …
both a conceptual and a technical foundation for the understanding and analysis of …
Active vertex model for cell-resolution description of epithelial tissue mechanics
We introduce an Active Vertex Model (AVM) for cell-resolution studies of the mechanics of
confluent epithelial tissues consisting of tens of thousands of cells, with a level of detail …
confluent epithelial tissues consisting of tens of thousands of cells, with a level of detail …
Simulating tissue mechanics with agent-based models: concepts, perspectives and some novel results
In this paper we present an overview of agent-based models that are used to simulate
mechanical and physiological phenomena in cells and tissues, and we discuss underlying …
mechanical and physiological phenomena in cells and tissues, and we discuss underlying …
Chaste: an open source C++ library for computational physiology and biology
Chaste—C ancer, H eart A nd S oft T issue E nvironment—is an open source C++ library for
the computational simulation of mathematical models developed for physiology and biology …
the computational simulation of mathematical models developed for physiology and biology …
Comparing individual-based approaches to modelling the self-organization of multicellular tissues
The coordinated behaviour of populations of cells plays a central role in tissue growth and
renewal. Cells react to their microenvironment by modulating processes such as movement …
renewal. Cells react to their microenvironment by modulating processes such as movement …
Mechanics and remodelling of cell packings in epithelia
Epithelia are sheets of cells that are dynamically remodelled by cell division and cell death
during development. Here we describe the cell shapes and packings as networks of …
during development. Here we describe the cell shapes and packings as networks of …
Mathematical modelling reveals cellular dynamics within tumour spheroids
Tumour spheroids are widely used as an in vitro assay for characterising the dynamics and
response to treatment of different cancer cell lines. Their popularity is largely due to the …
response to treatment of different cancer cell lines. Their popularity is largely due to the …
Mechanocellular models of epithelial morphogenesis
Embryonic epithelia achieve complex morphogenetic movements, including in-plane
resha**, bending and folding, through the coordinated action and rearrangement of …
resha**, bending and folding, through the coordinated action and rearrangement of …