Nested sampling for physical scientists
G Ashton, N Bernstein, J Buchner, X Chen… - Nature Reviews …, 2022 - nature.com
Abstract This Primer examines Skilling's nested sampling algorithm for Bayesian inference
and, more broadly, multidimensional integration. The principles of nested sampling are …
and, more broadly, multidimensional integration. The principles of nested sampling are …
Structural properties of sub-nanometer metallic clusters
F Baletto - Journal of Physics: Condensed Matter, 2019 - iopscience.iop.org
At the nanoscale, the investigation of structural features becomes fundamental as we can
establish relationships between cluster geometries and their physicochemical properties …
establish relationships between cluster geometries and their physicochemical properties …
Energy landscapes for proteins: From single funnels to multifunctional systems
This report advances the hypothesis that multifunctional systems may be associated with
multifunnel potential and free energy landscapes, with particular focus on biomolecules. It …
multifunnel potential and free energy landscapes, with particular focus on biomolecules. It …
Nested sampling for materials
We review the materials science applications of the nested sampling (NS) method, which
was originally conceived for calculating the evidence in Bayesian inference. We describe …
was originally conceived for calculating the evidence in Bayesian inference. We describe …
Deep learning and genetic algorithms for cosmological Bayesian inference speed-up
In this paper, we present a novel approach to accelerate the Bayesian inference process,
focusing specifically on the nested sampling algorithms. Bayesian inference plays a crucial …
focusing specifically on the nested sampling algorithms. Bayesian inference plays a crucial …
Determining pressure-temperature phase diagrams of materials
We extend the nested sampling algorithm to simulate materials under periodic boundary
and constant pressure conditions, and show how it can be used to determine the complete …
and constant pressure conditions, and show how it can be used to determine the complete …
Understanding population annealing Monte Carlo simulations
Population annealing is a recent addition to the arsenal of the practitioner in computer
simulations in statistical physics and it proves to deal well with systems with complex free …
simulations in statistical physics and it proves to deal well with systems with complex free …
Superposition enhanced nested sampling
The theoretical analysis of many problems in physics, astronomy, and applied mathematics
requires an efficient numerical exploration of multimodal parameter spaces that exhibit …
requires an efficient numerical exploration of multimodal parameter spaces that exhibit …
Bayesian inference of the spatial distributions of material properties
The inverse problem of estimating the spatial distributions of elastic material properties from
noisy strain measurements is ill-posed. However, it is still typically treated as an optimisation …
noisy strain measurements is ill-posed. However, it is still typically treated as an optimisation …
Unbiased and consistent nested sampling via sequential Monte Carlo
We introduce a new class of sequential Monte Carlo methods called nested sampling via
sequential Monte Carlo (NS-SMC), which reformulates the essence of the nested sampling …
sequential Monte Carlo (NS-SMC), which reformulates the essence of the nested sampling …