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Tumor heterogeneity: preclinical models, emerging technologies, and future applications
Heterogeneity describes the differences among cancer cells within and between tumors. It
refers to cancer cells describing variations in morphology, transcriptional profiles …
refers to cancer cells describing variations in morphology, transcriptional profiles …
The evolution of tumour phylogenetics: principles and practice
Rapid advances in high-throughput sequencing and a growing realization of the importance
of evolutionary theory to cancer genomics have led to a proliferation of phylogenetic studies …
of evolutionary theory to cancer genomics have led to a proliferation of phylogenetic studies …
Meaningful explanations of black box AI decision systems
Black box AI systems for automated decision making, often based on machine learning over
(big) data, map a user's features into a class or a score without exposing the reasons why …
(big) data, map a user's features into a class or a score without exposing the reasons why …
Detecting repeated cancer evolution from multi-region tumor sequencing data
Recurrent successions of genomic changes, both within and between patients, reflect
repeated evolutionary processes that are valuable for the anticipation of cancer progression …
repeated evolutionary processes that are valuable for the anticipation of cancer progression …
[HTML][HTML] From genotypes to organisms: State-of-the-art and perspectives of a cornerstone in evolutionary dynamics
Understanding how genotypes map onto phenotypes, fitness, and eventually organisms is
arguably the next major missing piece in a fully predictive theory of evolution. We refer to this …
arguably the next major missing piece in a fully predictive theory of evolution. We refer to this …
Comparative proteogenomic analysis of right-sided colon cancer, left-sided colon cancer and rectal cancer reveals distinct mutational profiles
Right-sided colon cancer (RCC) has worse prognosis compared to left-sided colon cancer
(LCC) and rectal cancer. The reason for this difference in outcomes is not well understood …
(LCC) and rectal cancer. The reason for this difference in outcomes is not well understood …
[HTML][HTML] Acceptance of near-natural greenspace management relates to ecological and socio-cultural assigned values among European urbanites
Grasslands are widespread elements of urban greenspace providing recreational,
psychological and aesthetic benefits to city residents. Two urban grassland types of …
psychological and aesthetic benefits to city residents. Two urban grassland types of …
Recapitulating the adenoma–carcinoma sequence by selection of four spontaneous oncogenic mutations in mismatch-repair-deficient human colon organoids
Carcinogenesis results from the sequential acquisition of oncogenic mutations that convert
normal cells into invasive, metastasizing cancer cells. Colorectal cancer exemplifies this …
normal cells into invasive, metastasizing cancer cells. Colorectal cancer exemplifies this …
Joint inference of exclusivity patterns and recurrent trajectories from tumor mutation trees
Cancer progression is an evolutionary process shaped by both deterministic and stochastic
forces. Multi-region and single-cell sequencing of tumors enable high-resolution …
forces. Multi-region and single-cell sequencing of tumors enable high-resolution …
Evolutionary signatures of human cancers revealed via genomic analysis of over 35,000 patients
Recurring sequences of genomic alterations occurring across patients can highlight
repeated evolutionary processes with significant implications for predicting cancer …
repeated evolutionary processes with significant implications for predicting cancer …