Molecular basis of MAP kinase regulation

W Peti, R Page - Protein science, 2013 - Wiley Online Library
Mitogen‐activated protein kinases (MAPKs; ERK1/2, p38, JNK, and ERK5) have evolved to
transduce environmental and developmental signals (growth factors, stress) into adaptive …

Bringing dynamic molecular machines into focus by methyl-TROSY NMR

R Rosenzweig, LE Kay - Annual review of biochemistry, 2014 - annualreviews.org
Large macromolecular assemblies, so-called molecular machines, are critical to ensuring
proper cellular function. Understanding how proper function is achieved at the atomic level …

Two-dimensional NMR lineshape analysis

CA Waudby, A Ramos, LD Cabrita, J Christodoulou - Scientific reports, 2016 - nature.com
NMR titration experiments are a rich source of structural, mechanistic, thermodynamic and
kinetic information on biomolecular interactions, which can be extracted through the …

Structures and dynamics of dengue virus nonstructural membrane proteins

Q Li, C Kang - Membranes, 2022 - mdpi.com
Dengue virus is an important human pathogen threating people, especially in tropical and
sub-tropical regions. The viral genome has one open reading frame and encodes one …

PyInteraph: a framework for the analysis of interaction networks in structural ensembles of proteins

M Tiberti, G Invernizzi, M Lambrughi… - Journal of chemical …, 2014 - ACS Publications
In the last years, a growing interest has been gathering around the ability of Molecular
Dynamics (MD) to provide insight into the paths of long-range structural communication in …

Interplay of protein disorder in retinoic acid receptor heterodimer and its corepressor regulates gene expression

TN Cordeiro, N Sibille, P Germain, P Barthe… - Structure, 2019 - cell.com
In its unliganded form, the retinoic acid receptor (RAR) in heterodimer with the retinoid X
receptor (RXR) exerts a strong repressive activity facilitated by the recruitment of …

Applications of in-cell NMR in structural biology and drug discovery

CB Kang - International journal of molecular sciences, 2019 - mdpi.com
In-cell nuclear magnetic resonance (NMR) is a method to provide the structural information
of a target at an atomic level under physiological conditions and a full view of the …

[HTML][HTML] NMR approaches in structure-based lead discovery: recent developments and new frontiers for targeting multi-protein complexes

DM Dias, A Ciulli - Progress in biophysics and molecular biology, 2014 - Elsevier
Nuclear magnetic resonance (NMR) spectroscopy is a pivotal method for structure-based
and fragment-based lead discovery because it is one of the most robust techniques to …

Automatic assignment of methyl-NMR spectra of supramolecular machines using graph theory

I Pritisanac, MT Degiacomi, TR Alderson… - Journal of the …, 2017 - ACS Publications
Methyl groups are powerful probes for the analysis of structure, dynamics and function of
supramolecular assemblies, using both solution-and solid-state NMR. Widespread …

K-Ras G-domain binding with signaling lipid phosphatidylinositol (4, 5)-phosphate (PIP2): membrane association, protein orientation, and function

S Cao, S Chung, SJ Kim, Z Li, D Manor… - Journal of Biological …, 2019 - jbc.org
Ras genes potently drive human cancers, with mutated proto-oncogene GTPase KRAS4B (K-
Ras4B) being the most abundant isoform. Targeted inhibition of oncogenic gene products is …