An automated Raman-based platform for the sorting of live cells by functional properties
Stable-isotope probing is widely used to study the function of microbial taxa in their natural
environment, but sorting of isotopically labelled microbial cells from complex samples for …
environment, but sorting of isotopically labelled microbial cells from complex samples for …
Genome-reconstruction for eukaryotes from complex natural microbial communities
Microbial eukaryotes are integral components of natural microbial communities, and their
inclusion is critical for many ecosystem studies, yet the majority of published metagenome …
inclusion is critical for many ecosystem studies, yet the majority of published metagenome …
Cryptic diversity of cellulose-degrading gut bacteria in industrialized humans
Humans, like all mammals, depend on the gut microbiome for digestion of cellulose, the
main component of plant fiber. However, evidence for cellulose fermentation in the human …
main component of plant fiber. However, evidence for cellulose fermentation in the human …
Uncultured Nitrospina-like species are major nitrite oxidizing bacteria in oxygen minimum zones
Oxygen minimum zones (OMZs) are marine regions where O2 is undetectable at
intermediate depths. Within OMZs, the oxygen-depleted zone (ODZ) induces anaerobic …
intermediate depths. Within OMZs, the oxygen-depleted zone (ODZ) induces anaerobic …
Machine learning leveraging genomes from metagenomes identifies influential antibiotic resistance genes in the infant gut microbiome
Antibiotic resistance in pathogens is extensively studied, and yet little is known about how
antibiotic resistance genes of typical gut bacteria influence microbiome dynamics. Here, we …
antibiotic resistance genes of typical gut bacteria influence microbiome dynamics. Here, we …
Phylogeny and metabolic potential of the candidate phylum SAR324
Simple Summary SAR324, newly proposed as its own candidate phylum, is a diverse and
globally abundant bacterial group living in a wide range of environments, from deep-sea …
globally abundant bacterial group living in a wide range of environments, from deep-sea …
Metaproteome plasticity sheds light on the ecology of the rumen microbiome and its connection to host traits
The arsenal of genes that microbes express reflect the way in which they sense their
environment. We have previously reported that the rumen microbiome composition and its …
environment. We have previously reported that the rumen microbiome composition and its …
Diverse microbiome functions, limited temporal variation and substantial genomic conservation within sedimentary and granite rock deep underground research …
Abstract Background Underground research laboratories (URLs) provide a window on the
deep biosphere and enable investigation of potential microbial impacts on nuclear waste …
deep biosphere and enable investigation of potential microbial impacts on nuclear waste …
Multiple independent losses of sporulation and peptidoglycan in the Mycoplasmatales and related orders of the class Bacilli
CJ Field, KL Bowerman… - Microbial …, 2024 - microbiologyresearch.org
Many peptidoglycan-deficient bacteria such as the Mycoplasmatales are known host-
associated lineages, lacking the environmental resistance mechanisms and metabolic …
associated lineages, lacking the environmental resistance mechanisms and metabolic …
A holo-omics analysis shows how sugar kelp can boost gut health in Atlantic salmon
The projected growth of Aquaculture requires continuous optimisation of feeding regimes,
especially in enhancing disease resilience through immunostimulating feed supplements …
especially in enhancing disease resilience through immunostimulating feed supplements …