Protein design: From the aspect of water solubility and stability
Water solubility and structural stability are key merits for proteins defined by the primary
sequence and 3D-conformation. Their manipulation represents important aspects of the …
sequence and 3D-conformation. Their manipulation represents important aspects of the …
Macromolecular modeling and design in Rosetta: recent methods and frameworks
The Rosetta software for macromolecular modeling, docking and design is extensively used
in laboratories worldwide. During two decades of development by a community of …
in laboratories worldwide. During two decades of development by a community of …
The Rosetta all-atom energy function for macromolecular modeling and design
Over the past decade, the Rosetta biomolecular modeling suite has informed diverse
biological questions and engineering challenges ranging from interpretation of low …
biological questions and engineering challenges ranging from interpretation of low …
Structures of the σ2 receptor enable docking for bioactive ligand discovery
The σ2 receptor has attracted intense interest in cancer imaging, psychiatric disease,
neuropathic pain,–and other areas of biology,. Here we determined the crystal structure of …
neuropathic pain,–and other areas of biology,. Here we determined the crystal structure of …
Coarse-grained protein models and their applications
The traditional computational modeling of protein structure, dynamics, and interactions
remains difficult for many protein systems. It is mostly due to the size of protein …
remains difficult for many protein systems. It is mostly due to the size of protein …
[HTML][HTML] Antidepressant drugs act by directly binding to TRKB neurotrophin receptors
It is unclear how binding of antidepressant drugs to their targets gives rise to the clinical
antidepressant effect. We discovered that the transmembrane domain of tyrosine kinase …
antidepressant effect. We discovered that the transmembrane domain of tyrosine kinase …
Recent advances in de novo protein design: Principles, methods, and applications
The computational de novo protein design is increasingly applied to address a number of
key challenges in biomedicine and biological engineering. Successes in expanding …
key challenges in biomedicine and biological engineering. Successes in expanding …
Caveolin-1 dolines form a distinct and rapid caveolae-independent mechanoadaptation system
In response to different types and intensities of mechanical force, cells modulate their
physical properties and adapt their plasma membrane (PM). Caveolae are PM nano …
physical properties and adapt their plasma membrane (PM). Caveolae are PM nano …
Interdependence of a mechanosensitive anion channel and glutamate receptors in distal wound signaling
J Moe-Lange, NM Gappel, M Machado, MM Wudick… - Science …, 2021 - science.org
Glutamate has dual roles in metabolism and signaling; thus, signaling functions must be
isolatable and distinct from metabolic fluctuations, as seen in low-glutamate domains at …
isolatable and distinct from metabolic fluctuations, as seen in low-glutamate domains at …
Accurate computational design of multipass transmembrane proteins
The computational design of transmembrane proteins with more than one membrane-
spanning region remains a major challenge. We report the design of transmembrane …
spanning region remains a major challenge. We report the design of transmembrane …