DNA barcoding as a new tool for food traceability

A Galimberti, F De Mattia, A Losa, I Bruni… - Food research …, 2013 - Elsevier
Food safety and quality are nowadays a major concern. Any case of food alteration,
especially when reported by the media, has a great impact on public opinion. There is an …

Advances in DNA metabarcoding for food and wildlife forensic species identification

M Staats, AJ Arulandhu, B Gravendeel… - Analytical and …, 2016 - Springer
Species identification using DNA barcodes has been widely adopted by forensic scientists
as an effective molecular tool for tracking adulterations in food and for analysing samples …

Delimiting species using single-locus data and the Generalized Mixed Yule Coalescent approach: a revised method and evaluation on simulated data sets

T Fujisawa, TG Barraclough - Systematic biology, 2013 - academic.oup.com
DNA barcoding-type studies assemble single-locus data from large samples of individuals
and species, and have provided new kinds of data for evolutionary surveys of diversity. An …

Using environmental DNA to census marine fishes in a large mesocosm

RP Kelly, JA Port, KM Yamahara, LB Crowder - PloS one, 2014 - journals.plos.org
The ocean is a soup of its resident species' genetic material, cast off in the forms of
metabolic waste, shed skin cells, or damaged tissue. Sampling this environmental DNA …

DNA barcoding as a plant identification method

S Letsiou, P Madesis, E Vasdekis, C Montemurro… - Applied Sciences, 2024 - mdpi.com
In the last two decades, plant taxonomy has bloomed, following the development of a novel
technique, namely, DNA barcoding. DNA barcodes are standardized sequences, ideally …

Bioinformatic challenges for DNA metabarcoding of plants and animals

E Coissac, T Riaz, N Puillandre - Molecular ecology, 2012 - Wiley Online Library
Almost all empirical studies in ecology have to identify the species involved in the ecological
process under examination. DNA metabarcoding, which couples the principles of DNA …

Over 2.5 million COI sequences in GenBank and growing

TM Porter, M Hajibabaei - PloS one, 2018 - journals.plos.org
The increasing popularity of cytochrome c oxidase subunit 1 (COI) DNA metabarcoding
warrants a careful look at the underlying reference databases used to make high-throughput …

Beyond barcoding: A mitochondrial genomics approach to molecular phylogenetics and diagnostics of blowflies (Diptera: Calliphoridae)

LA Nelson, CL Lambkin, P Batterham, JF Wallman… - Gene, 2012 - Elsevier
Members of the Calliphoridae (blowflies) are significant for medical and veterinary
management, due to the ability of some species to consume living flesh as larvae, and for …

Taxonomic resolutions based on 18S rRNA genes: a case study of subclass Copepoda

S Wu, J **ong, Y Yu - PloS one, 2015 - journals.plos.org
Biodiversity studies are commonly conducted using 18S rRNA genes. In this study, we
compared the inter-species divergence of variable regions (V1–9) within the copepod 18S …

An extension of the Kimura two-parameter model to the natural evolutionary process

T Nishimaki, K Sato - Journal of molecular evolution, 2019 - Springer
Accurate estimates of genetic difference are required for research in evolutionary biology.
Here we extend the Kimura two-parameter (K2P) model by considering gaps (insertions …