An overview and metanalysis of machine and deep learning-based CRISPR gRNA design tools

J Wang, X Zhang, L Cheng, Y Luo - RNA biology, 2020 - Taylor & Francis
The CRISPR-Cas9 system has become the most promising and versatile tool for genetic
manipulation applications. Albeit the technology has been broadly adopted by both …

Challenges and perspectives in homology-directed gene targeting in monocot plants

T Van Vu, YW Sung, J Kim, DTH Doan, MT Tran… - Rice, 2019 - Springer
Continuing crop domestication/redomestication and modification is a key determinant of the
adaptation and fulfillment of the food requirements of an exploding global population under …

CtIP fusion to Cas9 enhances transgene integration by homology-dependent repair

M Charpentier, AHY Khedher, S Menoret… - Nature …, 2018 - nature.com
In genome editing with CRISPR–Cas9, transgene integration often remains challenging.
Here, we present an approach for increasing the efficiency of transgene integration by …

CRISPR-C: circularization of genes and chromosome by CRISPR in human cells

HD Møller, L Lin, X **ang, TS Petersen… - Nucleic acids …, 2018 - academic.oup.com
Extrachromosomal circular DNA (eccDNA) and ring chromosomes are genetic alterations
found in humans with genetic disorders. However, there is a lack of genetic engineering …

Massively targeted evaluation of therapeutic CRISPR off-targets in cells

X Pan, K Qu, H Yuan, X **ang, C Anthon… - Nature …, 2022 - nature.com
Methods for sensitive and high-throughput evaluation of CRISPR RNA-guided nucleases
(RGNs) off-targets (OTs) are essential for advancing RGN-based gene therapies. Here we …

FcRn overexpression in human cancer drives albumin recycling and cell growth; a mechanistic basis for exploitation in targeted albumin-drug designs

MT Larsen, OA Mandrup, KK Schelde, Y Luo… - Journal of Controlled …, 2020 - Elsevier
Albumin accumulation in tumours could reflect a role of albumin in transport of endogenous
nutrient cargos required for cellular growth and not just a suggested source of amino acids; …

Ocular delivery of CRISPR/Cas genome editing components for treatment of eye diseases

W Yu, Z Wu - Advanced drug delivery reviews, 2021 - Elsevier
A variety of inherited or multifactorial ocular diseases call for novel treatment paradigms. The
newly developed genome editing technology, CRISPR, has shown great promise in treating …

Applications of alternative nucleases in the age of CRISPR/Cas9

TK Guha, DR Edgell - International journal of molecular sciences, 2017 - mdpi.com
Breakthroughs in the development of programmable site-specific nucleases, including zinc-
finger nucleases (ZFNs), transcription activator-like effector nucleases (TALENs) …

Tuning CRISPR-Cas9 Gene Drives in Saccharomyces cerevisiae

E Roggenkamp, RM Giersch… - G3: Genes …, 2018 - academic.oup.com
Control of biological populations is an ongoing challenge in many fields, including
agriculture, biodiversity, ecological preservation, pest control, and the spread of disease. In …

CRISPR RNA-guided autonomous delivery of Cas9

RA Wilkinson, C Martin, AA Nemudryi… - Nature structural & …, 2019 - nature.com
Cas9 is an endonuclease that can be programed to autonomously deliver diverse effectors
to specified genetic addresses. High-resolution structures of this protein and its associated …