Polarization microscopy: from ensemble structural imaging to single-molecule 3D orientation and localization microscopy

S Brasselet, MA Alonso - Optica, 2023 - opg.optica.org
Optical contrasts in microscopy are sensitive to light polarization, whose interaction with
molecular dipoles provides an important lever for probing molecular orientation. Polarization …

Fluorescence microscopy: a statistics-optics perspective

M Fazel, KS Grussmayer, B Ferdman, A Radenovic… - Reviews of Modern …, 2024 - APS
Fundamental properties of light unavoidably impose features on images collected using
fluorescence microscopes. Accounting for these features is often critical in quantitatively …

Six-dimensional single-molecule imaging with isotropic resolution using a multi-view reflector microscope

O Zhang, Z Guo, Y He, T Wu, MD Vahey, MD Lew - Nature photonics, 2023 - nature.com
Imaging of both the positions and orientations of single fluorophores, termed single-
molecule orientation-localization microscopy, is a powerful tool for the study of biochemical …

Resolving the nanoscale structure of β-sheet peptide self-assemblies using single-molecule orientation–localization microscopy

W Zhou, CL O'Neill, T Ding, O Zhang, JS Rudra… - ACS …, 2024 - ACS Publications
Synthetic peptides that self-assemble into cross-β fibrils are versatile building blocks for
engineered biomaterials due to their modularity and biocompatibility, but their structural and …

Fundamental limits in measuring the anisotropic rotational diffusion of single molecules

W Zhou, T Wu, MD Lew - The Journal of Physical Chemistry A, 2024 - ACS Publications
Many biophysical techniques, such as single-molecule fluorescence correlation
spectroscopy, Förster resonance energy transfer, and fluorescence anisotropy, measure …

POLCAM: instant molecular orientation microscopy for the life sciences

E Bruggeman, O Zhang, LM Needham, M Körbel… - Nature …, 2024 - nature.com
Current methods for single-molecule orientation localization microscopy (SMOLM) require
optical setups and algorithms that can be prohibitively slow and complex, limiting …

Combining deep learning approaches and point spread function engineering for simultaneous 3D position and 3D orientation measurements of fluorescent single …

P Jouchet, AR Roy, WE Moerner - Optics communications, 2023 - Elsevier
Abstract Point Spread Function (PSF) engineering is an effective method to increase the
sensitivity of single-molecule fluorescence images to specific parameters. Classical phase …

Geometric descriptions for the polarization of nonparaxial light: a tutorial

MA Alonso - Advances in Optics and Photonics, 2023 - opg.optica.org
This tutorial provides an overview of the local description of polarization for nonparaxial
light, for which all Cartesian components of the electric field are significant. The polarization …

Calcite-assisted localization and kinetics (clock) microscopy

JW Monaghan, ZJ O'Dell, S Sridhar… - The Journal of …, 2022 - ACS Publications
Localization-based super-resolution imaging techniques have improved the spatial
resolution of optical microscopy well below the diffraction limit, yet encoding additional …

Deep learning in single-molecule imaging and analysis: recent advances and prospects

X Liu, Y Jiang, Y Cui, J Yuan, X Fang - Chemical Science, 2022 - pubs.rsc.org
Single-molecule microscopy is advantageous in characterizing heterogeneous dynamics at
the molecular level. However, there are several challenges that currently hinder the wide …