[HTML][HTML] The mucosal immune system of teleost fish

I Salinas - Biology, 2015 - mdpi.com
Teleost fish possess an adaptive immune system associated with each of their mucosal
body surfaces. Evidence obtained from mucosal vaccination and mucosal infection studies …

RNA-Seq technology and its application in fish transcriptomics

X Qian, Y Ba, Q Zhuang, G Zhong - Omics: a journal of integrative …, 2014 - liebertpub.com
High-throughput sequencing technologies, also known as next-generation sequencing
(NGS) technologies, have revolutionized the way that genomic research is advancing. In …

The channel catfish genome sequence provides insights into the evolution of scale formation in teleosts

Z Liu, S Liu, J Yao, L Bao, J Zhang, Y Li, C Jiang… - Nature …, 2016 - nature.com
Catfish represent 12% of teleost or 6.3% of all vertebrate species, and are of enormous
economic value. Here we report a high-quality reference genome sequence of channel …

Aquaculture genomics, genetics and breeding in the United States: current status, challenges, and priorities for future research

Aquaculture Genomics, Genetics and Breeding … - BMC genomics, 2017 - Springer
Advancing the production efficiency and profitability of aquaculture is dependent upon the
ability to utilize a diverse array of genetic resources. The ultimate goals of aquaculture …

Toll-like receptor recognition of bacteria in fish: ligand specificity and signal pathways

J Zhang, X Kong, C Zhou, L Li, G Nie, X Li - Fish & shellfish immunology, 2014 - Elsevier
Pattern recognition receptors (PRRs) recognize the conserved molecular structure of
pathogens and trigger the signaling pathways that activate immune cells in response to …

Transcriptomics in aquaculture: current status and applications

S Chandhini, VJ Rejish Kumar - Reviews in Aquaculture, 2019 - Wiley Online Library
Transcriptomics is the analysis of total RNA transcript in a cell, which gives a broad idea of
cellular processes that are active and dormant. Recent advancement in next‐generation …

RNA-Seq reveals expression signatures of genes involved in oxygen transport, protein synthesis, folding, and degradation in response to heat stress in catfish

S Liu, X Wang, F Sun, J Zhang, J Feng… - Physiological …, 2013 - journals.physiology.org
Temperature is one of the most prominent abiotic factors affecting ectotherms. Most fish
species, as ectotherms, have extraordinary ability to deal with a wide range of temperature …

A high-throughput SNP discovery strategy for RNA-seq data

Y Zhao, K Wang, W Wang, T Yin, W Dong, C Xu - BMC genomics, 2019 - Springer
Background Single nucleotide polymorphisms (SNP) have been applied as important
molecular markers in genetics and breeding studies. The rapid advance of next generation …

Large-scale transcriptome sequencing reveals novel expression patterns for key sex-related genes in a sex-changing fish

H Liu, MS Lamm, K Rutherford, MA Black… - Biology of Sex …, 2015 - Springer
Background Teleost fishes exhibit remarkably diverse and plastic sexual developmental
patterns. One of the most astonishing is the rapid socially controlled female-to-male …

Transcriptional regulation of hypoxia inducible factors alpha (HIF-α) and their inhibiting factor (FIH-1) of channel catfish (Ictalurus punctatus) under hypoxia

X Geng, J Feng, S Liu, Y Wang, C Arias, Z Liu - … and Physiology Part B …, 2014 - Elsevier
Hypoxia inducible factors (HIFs) are considered to be the master switch of oxygen-
dependent gene expression with mammalian species. In most cases, regulation of HIF has …