Anaerobic co-digestion: Current status and perspectives

R Karki, W Chuenchart, KC Surendra, S Shrestha… - Bioresource …, 2021 - Elsevier
Anaerobic digestion is a long-established technology for the valorization of diverse organic
wastes with concomitant generation of valuable resources. However, mono-digestion (ie …

Cardiometabolic health, diet and the gut microbiome: a meta-omics perspective

M Valles-Colomer, C Menni, SE Berry, AM Valdes… - Nature Medicine, 2023 - nature.com
Cardiometabolic diseases have become a leading cause of morbidity and mortality globally.
They have been tightly linked to microbiome taxonomic and functional composition, with diet …

MiDAS 4: A global catalogue of full-length 16S rRNA gene sequences and taxonomy for studies of bacterial communities in wastewater treatment plants

MKD Dueholm, M Nierychlo, KS Andersen… - Nature …, 2022 - nature.com
Microbial communities are responsible for biological wastewater treatment, but our
knowledge of their diversity and function is still poor. Here, we sequence more than 5 million …

Metabolic flexibility allows bacterial habitat generalists to become dominant in a frequently disturbed ecosystem

YJ Chen, PM Leung, JL Wood, SK Bay… - The ISME …, 2021 - academic.oup.com
Ecological theory suggests that habitat disturbance differentially influences distributions of
habitat generalist and specialist species. While well-established for macroorganisms, this …

From microbiome composition to functional engineering, one step at a time

SD Burz, S Causevic, A Dal Co… - Microbiology and …, 2023 - Am Soc Microbiol
Communities of microorganisms (microbiota) are present in all habitats on Earth and are
relevant for agriculture, health, and climate. Deciphering the mechanisms that determine …

Decrypting bacterial polyphenol metabolism in an anoxic wetland soil

BB McGivern, MM Tfaily, MA Borton, SM Kosina… - Nature …, 2021 - nature.com
Microorganisms play vital roles in modulating organic matter decomposition and nutrient
cycling in soil ecosystems. The enzyme latch paradigm posits microbial degradation of …

Into the microbial niche

LA Malard, A Guisan - Trends in Ecology & Evolution, 2023 - cell.com
The environmental niche concept describes the distribution of a taxon in the environment
and can be used to understand community dynamics, biological invasions, and the impact of …

Qu-omics elucidates the formation and spatio-temporal differentiation mechanism underlying the microecology of high temperature Daqu

L Yang, W Fan, Y Xu - Food Chemistry, 2024 - Elsevier
Even if fermented in the same qu-room, Daqu will form various microecologies. A gradual
differentiation of microbial population niches was observed within different qu-layers …

[HTML][HTML] Niche availability and competitive loss by facilitation control proliferation of bacterial strains intended for soil microbiome interventions

S Čaušević, M Dubey, M Morales, G Salazar… - Nature …, 2024 - nature.com
Microbiome engineering–the targeted manipulation of microbial communities–is considered
a promising strategy to restore ecosystems, but experimental support and mechanistic …

Unlocking secrets of microbial ecotoxicology: Recent achievements and future challenges

J Hellal, L Barthelmebs, A Bérard… - FEMS Microbiology …, 2023 - academic.oup.com
Environmental pollution is one of the main challenges faced by humanity. By their ubiquity
and vast range of metabolic capabilities, microorganisms are affected by pollution with …