Microbial community analysis using high-throughput sequencing technology: a beginner's guide for microbiologists

J Jo, J Oh, C Park - Journal of Microbiology, 2020 - Springer
Microbial communities present in diverse environments from deep seas to human body
niches play significant roles in the complex ecosystem and human health. Characterizing …

Sea cucumber significance: Drying techniques and India's comprehensive status

R Harini, V Natarajan, CK Sunil - Journal of Food Science, 2024 - Wiley Online Library
Sea cucumbers, members of the echinoderm class Holothuroidea, are marine invertebrates
with ecological significance and substantial commercial value. With approximately 1700 …

Draft genome of the sea cucumber Apostichopus japonicus and genetic polymorphism among color variants

J Jo, J Oh, HG Lee, HH Hong, SG Lee, S Cheon… - …, 2017 - academic.oup.com
Abstract The Japanese sea cucumber (Apostichopus japonicus Selenka 1867) is an
economically important species as a source of seafood and ingredient in traditional …

Neuropeptide precursors and neuropeptides in the sea cucumber Apostichopus japonicus: a genomic, transcriptomic and proteomic analysis

M Chen, A Talarovicova, Y Zheng, KB Storey… - Scientific Reports, 2019 - nature.com
The sea cucumber Apostichopus japonicus is a foodstuff with very high economic value in
China, Japan and other countries in south-east Asia. It is at the heart of a multibillion-dollar …

Metabolomic analysis of white, green and purple morphs of sea cucumber Apostichopus japonicus during body color pigmentation process

L **ng, L Sun, S Liu, L Zhang, J Sun, H Yang - … and Physiology Part D …, 2021 - Elsevier
The sea cucumber Apostichopus japonicus is an important economic species owing to their
high nutritive and medicinal value. Body color is one of the most important traits in the …

Reference assembly and gene expression analysis of Apostichopus japonicus larval development

AV Boyko, AS Girich, MG Eliseikina, SI Maslennikov… - Scientific Reports, 2019 - nature.com
The transcriptome of the holothurian Apostichopus japonicus was sequenced at four
developmental stages—blastula, gastrula, auricularia, pentactula—on an Illumina …

Transcriptional profiles of early stage red sea urchins (Mesocentrotus franciscanus) reveal differential regulation of gene expression across development

JM Wong, JD Gaitán-Espitia, GE Hofmann - Marine Genomics, 2019 - Elsevier
The red sea urchin, Mesocentrotus franciscanus, is an ecologically important kelp forest
species that also serves as a valuable fisheries resource. In this study, we have assembled …

Identification of Key Genes Correlated with Economic Trait Superiorities and Their SNP Screening Through Transcriptome Comparisons, WGCNA and Pearson …

J Sun, H Wang, Y Zhan, T Zhao, C Li, C Cheng… - Marine …, 2025 - Springer
Variation in morphology-driven economic traits is a common issue hindering the
development of the sea cucumber aquaculture industry. In this study, transcriptome …

MITF Contributes to the Body Color Differentiation of Sea Cucumbers Apostichopus japonicus through Expression Differences and Regulation of Downstream Genes

L **ng, S Liu, L Zhang, H Yang, L Sun - Biology, 2022 - mdpi.com
Simple Summary The sea cucumber Apostichopus japonicus is an ecologically significant
echinoderm with considerable nutritional and therapeutic value. Color variation of A …

A Novel Full-Length Transcriptome Resource for Sea Cucumber Apostichopus japonicus Using Pacbio SMRT Sequencing

Y Yang, M Chen, Y Wang, L Sun - Frontiers in Marine Science, 2022 - frontiersin.org
Sea cucumber (Apostichopus japonicus) is a representative economic aquaculture species
of echinoderms with a unique phylogeny and evolutionary classification. In China, the sea …