Evaluating robustness and sensitivity of the NanoString technologies nCounter platform to enable multiplexed gene expression analysis of clinical samples

MH Veldman-Jones, R Brant, C Rooney, C Geh… - Cancer research, 2015 - AACR
Abstract Analysis of clinical trial specimens such as formalin-fixed paraffin-embedded
(FFPE) tissue for molecular mechanisms of disease progression or drug response is often …

Molecular intrinsic versus clinical subty** in breast cancer: A comprehensive review

A Szymiczek, A Lone, MR Akbari - Clinical genetics, 2021 - Wiley Online Library
Breast cancer is a heterogeneous disease manifesting diversity at the molecular,
histological and clinical level. The development of breast cancer classification was centered …

Purity independent subty** of tumors (PurIST), a clinically robust, single-sample classifier for tumor subty** in pancreatic cancer

NU Rashid, XL Peng, C **, RA Moffitt, KE Volmar… - Clinical Cancer …, 2020 - AACR
Purpose: Molecular subty** for pancreatic cancer has made substantial progress in recent
years, facilitating the optimization of existing therapeutic approaches to improve clinical …

Targeting interleukin-6 as a strategy to overcome stroma-induced resistance to chemotherapy in gastric cancer

IH Ham, HJ Oh, H **, CA Bae, SM Jeon, KS Choi… - Molecular cancer, 2019 - Springer
Background Although the tumor stroma in solid tumors like gastric cancer (GC) plays a
crucial role in chemo-resistance, specific targets to inhibit the interaction between the …

Randomized phase II study of R-CHOP with or without bortezomib in previously untreated patients with non–germinal center B-cell–like diffuse large B-cell lymphoma

JP Leonard, KS Kolibaba, JA Reeves… - Journal of Clinical …, 2017 - ascopubs.org
Purpose To evaluate the impact of the addition of bortezomib to rituximab,
cyclophosphamide, doxorubicin, vincristine, and prednisone (R-CHOP) on outcomes in …

[HTML][HTML] Gene expression detection assay for cancer clinical use

S Narrandes, W Xu - Journal of Cancer, 2018 - ncbi.nlm.nih.gov
Cancer is a genetic disease where genetic variations cause abnormally functioning genes
that appear to alter expression. Proteins, the final products of gene expression, determine …

Human skeletal muscle macrophages increase following cycle training and are associated with adaptations that may facilitate growth

RG Walton, K Kosmac, J Mula, CS Fry, BD Peck… - Scientific reports, 2019 - nature.com
Skeletal muscle macrophages participate in repair and regeneration following injury.
However, their role in physiological adaptations to exercise is unexplored. We determined …

Differential activity of ATR and WEE1 inhibitors in a highly sensitive subpopulation of DLBCL linked to replication stress

LA Young, LO O'Connor, C de Renty… - Cancer Research, 2019 - AACR
DNA damage checkpoint kinases ATR and WEE1 are among key regulators of DNA
damage response pathways protecting cells from replication stress, a hallmark of cancer that …

The utilization of formalin fixed‐paraffin‐embedded specimens in high throughput genomic studies

P Zhang, BD Lehmann, Y Shyr… - International journal of …, 2017 - Wiley Online Library
High throughput genomic assays empower us to study the entire human genome in short
time with reasonable cost. Formalin fixed‐paraffin‐embedded (FFPE) tissue processing …

Long non‐coding RNA SNHG16 promotes proliferation and inhibits apoptosis of diffuse large B‐cell lymphoma cells by targeting miR‐497‐5p/PIM1 axis

Q Zhu, Y Li, Y Guo, L Hu, Z **ao, X Liu… - Journal of Cellular …, 2019 - Wiley Online Library
The aberrant expression and dysfunction of long non‐coding RNAs (lncRNAs) have been
identified as critical factors governing the initiation and progression of different human …