Electrostatic interactions in protein structure, folding, binding, and condensation

HX Zhou, X Pang - Chemical reviews, 2018 - ACS Publications
Charged and polar groups, through forming ion pairs, hydrogen bonds, and other less
specific electrostatic interactions, impart important properties to proteins. Modulation of the …

Water dynamics in the hydration shells of biomolecules

D Laage, T Elsaesser, JT Hynes - Chemical Reviews, 2017 - ACS Publications
The structure and function of biomolecules are strongly influenced by their hydration shells.
Structural fluctuations and molecular excitations of hydrating water molecules cover a broad …

A method for detergent-free isolation of membrane proteins in their local lipid environment

SC Lee, TJ Knowles, VLG Postis, M Jamshad… - Nature protocols, 2016 - nature.com
Despite the great importance of membrane proteins, structural and functional studies of
these proteins present major challenges. A significant hurdle is the extraction of the …

Folding and misfolding of human membrane proteins in health and disease: from single molecules to cellular proteostasis

JT Marinko, H Huang, WD Penn, JA Capra… - Chemical …, 2019 - ACS Publications
Advances over the past 25 years have revealed much about how the structural properties of
membranes and associated proteins are linked to the thermodynamics and kinetics of …

Mechanistic landscape of membrane-permeabilizing peptides

S Guha, J Ghimire, E Wu, WC Wimley - Chemical reviews, 2019 - ACS Publications
Membrane permeabilizing peptides (MPPs) are as ubiquitous as the lipid bilayer
membranes they act upon. Produced by all forms of life, most membrane permeabilizing …

Describing the mechanism of antimicrobial peptide action with the interfacial activity model

WC Wimley - ACS chemical biology, 2010 - ACS Publications
Antimicrobial peptides (AMPs) have been studied for three decades, and yet a molecular
understanding of their mechanism of action is still lacking. Here we summarize current …

Experimentally determined hydrophobicity scale for proteins at membrane interfaces

WC Wimley, SH White - Nature structural biology, 1996 - nature.com
The partitioning of membrane-active oligopeptides into membrane interfaces promotes the
formation of secondary structure. A quantitative description of the coupling of structure …

Membrane protein folding and stability: physical principles

SH White, WC Wimley - Annual review of biophysics and …, 1999 - annualreviews.org
▪ Abstract Stably folded membrane proteins reside in a free energy minimum determined by
the interactions of the peptide chains with each other, the lipid bilayer hydrocarbon core, the …

Mesoscopic simulation of cell membrane damage, morphology change and rupture by nonionic surfactants

RD Groot, KL Rabone - Biophysical journal, 2001 - cell.com
A new simulation method, dissipative particle dynamics, is applied to model biological
membranes. In this method, several atoms are united into a single simulation particle. The …

Bilayer thickness and membrane protein function: an energetic perspective

OS Andersen, RE Koeppe - Annu. Rev. Biophys. Biomol. Struct., 2007 - annualreviews.org
The lipid bilayer component of biological membranes is important for the distribution,
organization, and function of bilayer-spanning proteins. This regulation is due to both …