Priority effects in microbiome assembly

R Debray, RA Herbert, AL Jaffe… - Nature Reviews …, 2022 - nature.com
Advances in next-generation sequencing have enabled the widespread measurement of
microbiome composition across systems and over the course of microbiome assembly …

Arctic tundra shrubification: a review of mechanisms and impacts on ecosystem carbon balance

ZA Mekonnen, WJ Riley, LT Berner… - Environmental …, 2021 - iopscience.iop.org
Vegetation composition shifts, and in particular, shrub expansion across the Arctic tundra
are some of the most important and widely observed responses of high-latitude ecosystems …

Acidification suppresses the natural capacity of soil microbiome to fight pathogenic Fusarium infections

X Li, D Chen, VJ Carrión, D Revillini, S Yin… - Nature …, 2023 - nature.com
Soil-borne pathogens pose a major threat to food production worldwide, particularly under
global change and with growing populations. Yet, we still know very little about how the soil …

Standardized multi-omics of Earth's microbiomes reveals microbial and metabolite diversity

JP Shaffer, LF Nothias, LR Thompson, JG Sanders… - Nature …, 2022 - nature.com
Despite advances in sequencing, lack of standardization makes comparisons across studies
challenging and hampers insights into the structure and function of microbial communities …

Nitrogen fertilization weakens the linkage between soil carbon and microbial diversity: a global meta‐analysis

Y Yang, X Chen, L Liu, T Li, Y Dou, J Qiao… - Global Change …, 2022 - Wiley Online Library
Soil microbes make up a significant portion of the genetic diversity and play a critical role in
belowground carbon (C) cycling in terrestrial ecosystems. Soil microbial diversity and …

Meta-analysis of the impacts of global change factors on soil microbial diversity and functionality

Z Zhou, C Wang, Y Luo - Nature communications, 2020 - nature.com
Biodiversity on the Earth is changing at an unprecedented rate due to a variety of global
change factors (GCFs). However, the effects of GCFs on microbial diversity is unclear …

Soil microbial network complexity predicts ecosystem function along elevation gradients on the Tibetan Plateau

W Chen, J Wang, X Chen, Z Meng, R Xu… - Soil Biology and …, 2022 - Elsevier
The contributions of soil microbial diversity for the multifunctionality of ecosystem functions
remain little understood despite the well-known importance of soil microbial communities for …

Plant domestication shapes rhizosphere microbiome assembly and metabolic functions

H Yue, W Yue, S Jiao, H Kim, YH Lee, G Wei, W Song… - Microbiome, 2023 - Springer
Background The rhizosphere microbiome, which is shaped by host genotypes, root
exudates, and plant domestication, is crucial for sustaining agricultural plant growth. Despite …

Combined effects of host genetics and diet on human gut microbiota and incident disease in a single population cohort

Y Qin, AS Havulinna, Y Liu, P Jousilahti, SC Ritchie… - Nature Genetics, 2022 - nature.com
Human genetic variation affects the gut microbiota through a complex combination of
environmental and host factors. Here we characterize genetic variations associated with …

Towards the biogeography of prokaryotic genes

LP Coelho, R Alves, ÁR Del Río, PN Myers… - Nature, 2022 - nature.com
Microbial genes encode the majority of the functional repertoire of life on earth. However,
despite increasing efforts in metagenomic sequencing of various habitats,–, little is known …