Proteomic analysis of post-translational modifications

M Mann, ON Jensen - Nature biotechnology, 2003 - nature.com
Post-translational modifications modulate the activity of most eukaryote proteins. Analysis of
these modifications presents formidable challenges but their determination generates …

The ABC's (and XYZ's) of peptide sequencing

H Steen, M Mann - Nature reviews Molecular cell biology, 2004 - nature.com
Proteomics is an increasingly powerful and indispensable technology in molecular cell
biology. It can be used to identify the components of small protein complexes and large …

Higher-energy C-trap dissociation for peptide modification analysis

JV Olsen, B Macek, O Lange, A Makarov, S Horning… - Nature …, 2007 - nature.com
Peptide sequencing is the basis of mass spectrometry–driven proteomics. Here we show
that in the linear ion trap–orbitrap mass spectrometer (LTQ Orbitrap) peptide ions can be …

Analysis of proteins and proteomes by mass spectrometry

M Mann, RC Hendrickson… - Annual review of …, 2001 - annualreviews.org
▪ Abstract A decade after the discovery of electrospray and matrix-assisted laser desorption
ionization (MALDI), methods that finally allowed gentle ionization of large biomolecules …

An introduction to quadrupole–time‐of‐flight mass spectrometry

IV Chernushevich, AV Loboda… - Journal of mass …, 2001 - Wiley Online Library
A brief introduction is presented to the basic principles and application of a quadrupole–time‐
of‐flight (TOF) tandem mass spectrometer. The main features of reflecting TOF instruments …

Large-scale characterization of HeLa cell nuclear phosphoproteins

SA Beausoleil, M Jedrychowski, D Schwartz… - Proceedings of the …, 2004 - pnas.org
Determining the site of a regulatory phosphorylation event is often essential for elucidating
specific kinase–substrate relationships, providing a handle for understanding essential …

Orbitrap mass spectrometry: instrumentation, ion motion and applications

RH Perry, RG Cooks, RJ Noll - Mass spectrometry reviews, 2008 - Wiley Online Library
Since its introduction, the orbitrap has proven to be a robust mass analyzer that can routinely
deliver high resolving power and mass accuracy. Unlike conventional ion traps such as the …

Analysis of protein phosphorylation using mass spectrometry: deciphering the phosphoproteome

M Mann, SE Ong, M Grønborg, H Steen… - Trends in …, 2002 - cell.com
In signal transduction in eukaryotes, protein phosphorylation is a key event. To understand
signaling processes, we must first acquire an inventory of phosphoproteins and their …

[HTML][HTML] The impact II, a very high-resolution quadrupole time-of-flight instrument (QTOF) for deep shotgun proteomics

S Beck, A Michalski, O Raether, M Lubeck… - Molecular & Cellular …, 2015 - Elsevier
Hybrid quadrupole time-of-flight (QTOF) mass spectrometry is one of the two major
principles used in proteomics. Although based on simple fundamentals, it has over the last …

Phosphopeptide fragmentation and analysis by mass spectrometry

PJ Boersema, S Mohammed… - Journal of mass …, 2009 - Wiley Online Library
Reversible phosphorylation is a key event in many biological processes and is therefore a
much studied phenomenon. The mass spectrometric (MS) analysis of phosphorylation is …