Species-Wide Transposable Element Repertoires Retrace the Evolutionary History of the Saccharomyces cerevisiae Host
C Bleykasten-Grosshans, R Fabrizio… - Molecular Biology …, 2021 - academic.oup.com
Transposable elements (TE) are an important source of genetic variation with a dynamic and
content that greatly differ in a wide range of species. The origin of the intraspecific content …
content that greatly differ in a wide range of species. The origin of the intraspecific content …
Structure of a Ty1 restriction factor reveals the molecular basis of transposition copy number control
Excessive replication of Saccharomyces cerevisiae Ty1 retrotransposons is regulated by
Copy Number Control, a process requiring the p22/p18 protein produced from a sub …
Copy Number Control, a process requiring the p22/p18 protein produced from a sub …
The Ty1 retrotransposon harbors a DNA region that performs dual functions as both a gene silencing and chromatin insulator
H Masumoto, H Muto, K Yano, Y Kurosaki, H Niki - Scientific Reports, 2024 - nature.com
In various eukaryotic kingdoms, long terminal repeat (LTR) retrotransposons repress
transcription by infiltrating heterochromatin generated within their elements. In contrast, the …
transcription by infiltrating heterochromatin generated within their elements. In contrast, the …
RNAthor–fast, accurate normalization, visualization and statistical analysis of RNA probing data resolved by capillary electrophoresis
RNAs adopt specific structures to perform their functions, which are critical to fundamental
cellular processes. For decades, these structures have been determined and modeled with …
cellular processes. For decades, these structures have been determined and modeled with …
Retroviral-like determinants and functions required for dimerization of Ty1 retrotransposon RNA
During replication of long terminal repeat (LTR)-retrotransposons, their proteins and
genome (g) RNA assemble into virus-like particles (VLPs) that are not infectious but …
genome (g) RNA assemble into virus-like particles (VLPs) that are not infectious but …
In vivo structure of the Ty1 retrotransposon RNA genome
A Andrzejewska, M Zawadzka, J Gumna… - Nucleic acids …, 2021 - academic.oup.com
Long terminal repeat (LTR)-retrotransposons constitute a significant part of eukaryotic
genomes and influence their function and evolution. Like other RNA viruses, LTR …
genomes and influence their function and evolution. Like other RNA viruses, LTR …
Cell compartment-specific folding of Ty1 long terminal repeat retrotransposon RNA genome
M Zawadzka, A Andrzejewska-Romanowska, J Gumna… - Viruses, 2022 - mdpi.com
The structural transitions RNAs undergo during trafficking are not well understood. Here, we
used the well-developed yeast Ty1 retrotransposon to provide the first structural model of …
used the well-developed yeast Ty1 retrotransposon to provide the first structural model of …
RNA binding properties of the Ty1 LTR-retrotransposon Gag protein
J Gumna, A Andrzejewska-Romanowska… - International Journal of …, 2021 - mdpi.com
A universal feature of retroelement propagation is the formation of distinct nucleoprotein
complexes mediated by the Gag capsid protein. The Ty1 retrotransposon Gag protein from …
complexes mediated by the Gag capsid protein. The Ty1 retrotransposon Gag protein from …
New windows into retroviral RNA structures
D Jayaraman, JC Kenyon - Retrovirology, 2018 - Springer
Background The multiple roles of both viral and cellular RNAs have become increasingly
apparent in recent years, and techniques to model them have become significantly more …
apparent in recent years, and techniques to model them have become significantly more …
[PDF][PDF] Discovery of a novel restriction factor encoded by the retrotransposon ty1 in saccharomyces cerevisiae
A Saha - 2017 - getd.libs.uga.edu
Ty1 is the most active long terminal repeat (LTR) retrotransposon in Saccharomyces
cerevisiae and resembles retroviruses in genome organization and replication mechanisms …
cerevisiae and resembles retroviruses in genome organization and replication mechanisms …