Three-dimensional protein structure prediction: Methods and computational strategies
A long standing problem in structural bioinformatics is to determine the three-dimensional (3-
D) structure of a protein when only a sequence of amino acid residues is given. Many …
D) structure of a protein when only a sequence of amino acid residues is given. Many …
A comprehensive review and comparison of different computational methods for protein remote homology detection
Protein remote homology detection is one of the most fundamental and central problems for
the studies of protein structures and functions, aiming to detect the distantly evolutionary …
the studies of protein structures and functions, aiming to detect the distantly evolutionary …
Phototactic guidance of a tissue-engineered soft-robotic ray
Inspired by the relatively simple morphological blueprint provided by batoid fish such as
stingrays and skates, we created a biohybrid system that enables an artificial animal—a …
stingrays and skates, we created a biohybrid system that enables an artificial animal—a …
Crystal structure of Zika virus NS2B-NS3 protease in complex with a boronate inhibitor
The ongoing Zika virus (ZIKV) outbreak is linked to severe neurological disorders. ZIKV
relies on its NS2B/NS3 protease for polyprotein processing; hence, this enzyme is an …
relies on its NS2B/NS3 protease for polyprotein processing; hence, this enzyme is an …
D538G mutation in estrogen receptor-α: A novel mechanism for acquired endocrine resistance in breast cancer
K Merenbakh-Lamin, N Ben-Baruch, A Yeheskel… - Cancer research, 2013 - AACR
Resistance to endocrine therapy occurs in virtually all patients with estrogen receptor α
(ERα)-positive metastatic breast cancer, and is attributed to various mechanisms including …
(ERα)-positive metastatic breast cancer, and is attributed to various mechanisms including …
Natively glycosylated HIV-1 Env structure reveals new mode for antibody recognition of the CD4-binding site
HB Gristick, L von Boehmer, AP West Jr… - Nature structural & …, 2016 - nature.com
HIV-1 vaccine design is informed by structural studies elucidating mechanisms by which
broadly neutralizing antibodies (bNAbs) recognize and/or accommodate N-glycans on the …
broadly neutralizing antibodies (bNAbs) recognize and/or accommodate N-glycans on the …
The interplay of SARS-CoV-2 evolution and constraints imposed by the structure and functionality of its proteins
L Jaroszewski, M Iyer, A Alisoltani… - PLoS computational …, 2021 - journals.plos.org
The unprecedented pace of the sequencing of the SARS-CoV-2 virus genomes provides us
with unique information about the genetic changes in a single pathogen during ongoing …
with unique information about the genetic changes in a single pathogen during ongoing …
A pan-cancer catalogue of cancer driver protein interaction interfaces
Despite their importance in maintaining the integrity of all cellular pathways, the role of
mutations on protein-protein interaction (PPI) interfaces as cancer drivers has not been …
mutations on protein-protein interaction (PPI) interfaces as cancer drivers has not been …
Mechanisms of Lin28-mediated miRNA and mRNA regulation—a structural and functional perspective
F Mayr, U Heinemann - International journal of molecular sciences, 2013 - mdpi.com
Lin28 is an essential RNA-binding protein that is ubiquitously expressed in embryonic stem
cells. Its physiological function has been linked to the regulation of differentiation …
cells. Its physiological function has been linked to the regulation of differentiation …
Bioinformatic and functional characterization of the basic peroxidase 72 from Arabidopsis thaliana involved in lignin biosynthesis
J Herrero, F Fernández-Pérez, T Yebra, E Novo-Uzal… - Planta, 2013 - Springer
Lignins result from the oxidative polymerization of three hydroxycinnamyl (p-coumaryl,
coniferyl, and sinapyl) alcohols in a reaction mediated by peroxidases. The most important …
coniferyl, and sinapyl) alcohols in a reaction mediated by peroxidases. The most important …