The FLC Locus: A Platform for Discoveries in Epigenetics and Adaptation

C Whittaker, C Dean - Annual review of cell and developmental …, 2017 - annualreviews.org
Our understanding of the detailed molecular mechanisms underpinning adaptation is still
poor. One example for which mechanistic understanding of regulation has converged with …

Targeted capture in evolutionary and ecological genomics

MR Jones, JM Good - Molecular ecology, 2016 - Wiley Online Library
The rapid expansion of next‐generation sequencing has yielded a powerful array of tools to
address fundamental biological questions at a scale that was inconceivable just a few years …

Bottlenecks and selective sweeps during domestication have increased deleterious genetic variation in dogs

CD Marsden, D Ortega-Del Vecchyo… - Proceedings of the …, 2016 - pnas.org
Population bottlenecks, inbreeding, and artificial selection can all, in principle, influence
levels of deleterious genetic variation. However, the relative importance of each of these …

Natural selection constrains neutral diversity across a wide range of species

RB Corbett-Detig, DL Hartl, TB Sackton - PLoS biology, 2015 - journals.plos.org
The neutral theory of molecular evolution predicts that the amount of neutral polymorphisms
within a species will increase proportionally with the census population size (Nc). However …

Inference of the distribution of selection coefficients for new nonsynonymous mutations using large samples

BY Kim, CD Huber, KE Lohmueller - Genetics, 2017 - academic.oup.com
The distribution of fitness effects (DFE) has considerable importance in population genetics.
To date, estimates of the DFE come from studies using a small number of individuals. Thus …

Insights into mammalian biology from the wild house mouse Mus musculus

M Phifer-Rixey, MW Nachman - elife, 2015 - elifesciences.org
The house mouse, Mus musculus, was established in the early 1900s as one of the first
genetic model organisms owing to its short generation time, comparatively large litters, ease …

Evolutionary dynamics of coding and non-coding transcriptomes

A Necsulea, H Kaessmann - Nature Reviews Genetics, 2014 - nature.com
Gene expression changes may underlie much of phenotypic evolution. The development of
high-throughput RNA sequencing protocols has opened the door to unprecedented large …

Detecting positive selection in the genome

TR Booker, BC Jackson, PD Keightley - BMC biology, 2017 - Springer
Population geneticists have long sought to understand the contribution of natural selection
to molecular evolution. A variety of approaches have been proposed that use population …

Concerted copy number variation balances ribosomal DNA dosage in human and mouse genomes

JG Gibbons, AT Branco, SA Godinho, S Yu… - Proceedings of the …, 2015 - pnas.org
Tandemly repeated ribosomal DNA (rDNA) arrays are among the most evolutionary dynamic
loci of eukaryotic genomes. The loci code for essential cellular components, yet exhibit …

Causes of natural variation in fitness: Evidence from studies of Drosophila populations

B Charlesworth - Proceedings of the National Academy of Sciences, 2015 - pnas.org
DNA sequencing has revealed high levels of variability within most species. Statistical
methods based on population genetics theory have been applied to the resulting data and …