Phylogenetic insights into diversification

H Morlon, J Andréoletti, J Barido-Sottani… - Annual Review of …, 2024 - annualreviews.org
Species diversification—the balance between speciation and extinction—is fundamental to
our understanding of how species richness varies in space and time and throughout the …

An inverse latitudinal gradient in speciation rate for marine fishes

DL Rabosky, J Chang, PF Cowman, L Sallan… - Nature, 2018 - nature.com
Far more species of organisms are found in the tropics than in temperate and polar regions,
but the evolutionary and ecological causes of this pattern remain controversial 1, 2. Tropical …

The evolution of a tropical biodiversity hotspot

MG Harvey, GA Bravo, S Claramunt, AM Cuervo… - Science, 2020 - science.org
The tropics are the source of most biodiversity yet inadequate sampling obscures answers to
fundamental questions about how this diversity evolves. We leveraged samples assembled …

The ecological and genomic basis of explosive adaptive radiation

MD McGee, SR Borstein, JI Meier, DA Marques… - Nature, 2020 - nature.com
Speciation rates vary considerably among lineages, and our understanding of what drives
the rapid succession of speciation events within young adaptive radiations remains …

Hidden state models improve state-dependent diversification approaches, including biogeographical models

DS Caetano, BC O'Meara, JM Beaulieu - Evolution, 2018 - academic.oup.com
The state-dependent speciation and extinction (SSE) models have recently been criticized
due to their high rates of “false positive” results. Many researchers have advocated avoiding …

A model with many small shifts for estimating species-specific diversification rates

O Maliet, F Hartig, H Morlon - Nature ecology & evolution, 2019 - nature.com
Understanding how and why diversification rates vary through time and space and across
species groups is key to understanding the emergence of today's biodiversity. Phylogenetic …

A flexible method for estimating tip diversification rates across a range of speciation and extinction scenarios

T Vasconcelos, BC O'Meara, JM Beaulieu - Evolution, 2022 - academic.oup.com
Estimates of diversification rates at the tips of a phylogeny provide a flexible approach for
correlation analyses with multiple traits and to map diversification rates in space while also …

Rates of niche and phenotype evolution lag behind diversification in a temperate radiation

RA Folk, RL Stubbs, ME Mort, N Cellinese… - Proceedings of the …, 2019 - pnas.org
Environmental change can create opportunities for increased rates of lineage diversification,
but continued species accumulation has been hypothesized to lead to slowdowns via …

New beginnings for dead ends: polyploidy,-SSE models and the dead-end hypothesis

ER Hagen, JM Beaulieu - Annals of Botany, 2024 - academic.oup.com
Background Since the mid-20th century, it has been argued by some that the transition from
diploidy to polyploidy is an 'evolutionary dead end'in plants. Although this point has been …

Tip rates, phylogenies and diversification: what are we estimating, and how good are the estimates?

PO Title, DL Rabosky - Methods in Ecology and Evolution, 2019 - Wiley Online Library
Species‐specific diversification rates, or 'tip rates', can be computed quickly from
phylogenies and are widely used to study diversification rate variation in relation to …