Deep learning in medical image registration: a survey

G Haskins, U Kruger, P Yan - Machine Vision and Applications, 2020 - Springer
The establishment of image correspondence through robust image registration is critical to
many clinical tasks such as image fusion, organ atlas creation, and tumor growth monitoring …

Quicksilver: Fast predictive image registration–a deep learning approach

X Yang, R Kwitt, M Styner, M Niethammer - NeuroImage, 2017 - Elsevier
This paper introduces Quicksilver, a fast deformable image registration method. Quicksilver
registration for image-pairs works by patch-wise prediction of a deformation model based …

Hamiltonian systems and optimal control in computational anatomy: 100 years since D'Arcy Thompson

MI Miller, A Trouvé, L Younes - Annual review of biomedical …, 2015 - annualreviews.org
The Computational Anatomy project is the morphome-scale study of shape and form, which
we model as an orbit under diffeomorphic group action. Metric comparison calculates the …

Morphometry of anatomical shape complexes with dense deformations and sparse parameters

S Durrleman, M Prastawa, N Charon, JR Korenberg… - NeuroImage, 2014 - Elsevier
We propose a generic method for the statistical analysis of collections of anatomical shape
complexes, namely sets of surfaces that were previously segmented and labeled in a group …

Learning image-based spatial transformations via convolutional neural networks: A review

NJ Tustison, BB Avants, JC Gee - Magnetic resonance imaging, 2019 - Elsevier
Recent methodological innovations in deep learning and associated advancements in
computational hardware have significantly impacted the various core subfields of …

Networks for joint affine and non-parametric image registration

Z Shen, X Han, Z Xu… - Proceedings of the IEEE …, 2019 - openaccess.thecvf.com
We introduce an end-to-end deep-learning framework for 3D medical image registration. In
contrast to existing approaches, our framework combines two registration methods: an affine …

Fast predictive image registration

X Yang, R Kwitt, M Niethammer - Deep Learning and Data Labeling for …, 2016 - Springer
We present a method to predict image deformations based on patch-wise image
appearance. Specifically, we design a patch-based deep encoder-decoder network which …

Deepflash: An efficient network for learning-based medical image registration

J Wang, M Zhang - … of the IEEE/CVF conference on …, 2020 - openaccess.thecvf.com
This paper presents DeepFLASH, a novel network with efficient training and inference for
learning-based medical image registration. In contrast to existing approaches that learn …

Metric learning for image registration

M Niethammer, R Kwitt… - Proceedings of the IEEE …, 2019 - openaccess.thecvf.com
Image registration is a key technique in medical image analysis to estimate deformations
between image pairs. A good deformation model is important for high-quality estimates …

CorticalFlow: a diffeomorphic mesh transformer network for cortical surface reconstruction

L Lebrat, R Santa Cruz, F de Gournay… - Advances in …, 2021 - proceedings.neurips.cc
In this paper, we introduce CorticalFlow, a new geometric deep-learning model that, given a
3-dimensional image, learns to deform a reference template towards a targeted object. To …