Analysing ecological networks of species interactions

E Delmas, M Besson, MH Brice, LA Burkle… - Biological …, 2019 - Wiley Online Library
Network approaches to ecological questions have been increasingly used, particularly in
recent decades. The abstraction of ecological systems–such as communities–through …

Patch-based graphs of landscape connectivity: a guide to construction, analysis and application for conservation

P Galpern, M Manseau, A Fall - Biological conservation, 2011 - Elsevier
Graph theory has become a popular tool for modelling the functional connectivity of
landscapes. We conduct a review of studies that use graph theory to model connectivity …

Robust map** of spatiotemporal trajectories and cell–cell interactions in healthy and diseased tissues

D Pham, X Tan, B Balderson, J Xu, LF Grice… - Nature …, 2023 - nature.com
Spatial transcriptomics (ST) technologies generate multiple data types from biological
samples, namely gene expression, physical distance between data points, and/or tissue …

Comparing methods for comparing networks

M Tantardini, F Ieva, L Tajoli, C Piccardi - Scientific reports, 2019 - nature.com
With the impressive growth of available data and the flexibility of network modelling, the
problem of devising effective quantitative methods for the comparison of networks arises …

Graph based anomaly detection and description: a survey

L Akoglu, H Tong, D Koutra - Data mining and knowledge discovery, 2015 - Springer
Detecting anomalies in data is a vital task, with numerous high-impact applications in areas
such as security, finance, health care, and law enforcement. While numerous techniques …

Metrics for graph comparison: a practitioner's guide

P Wills, FG Meyer - Plos one, 2020 - journals.plos.org
Comparison of graph structure is a ubiquitous task in data analysis and machine learning,
with diverse applications in fields such as neuroscience, cyber security, social network …

[BOK][B] Spectra of graphs

AE Brouwer, WH Haemers - 2011 - books.google.com
This book gives an elementary treatment of the basic material about graph spectra, both for
ordinary, and Laplace and Seidel spectra. The text progresses systematically, by covering …

Netlsd: hearing the shape of a graph

A Tsitsulin, D Mottin, P Karras, A Bronstein… - Proceedings of the 24th …, 2018 - dl.acm.org
Comparison among graphs is ubiquitous in graph analytics. However, it is a hard task in
terms of the expressiveness of the employed similarity measure and the efficiency of its …

Graph matching and learning in pattern recognition in the last 10 years

P Foggia, G Percannella, M Vento - International Journal of Pattern …, 2014 - World Scientific
In this paper, we examine the main advances registered in the last ten years in Pattern
Recognition methodologies based on graph matching and related techniques, analyzing …

Graph reduction with spectral and cut guarantees

A Loukas - Journal of Machine Learning Research, 2019 - jmlr.org
Can one reduce the size of a graph without significantly altering its basic properties? The
graph reduction problem is hereby approached from the perspective of restricted spectral …