Some opinions on MD-based vibrational spectroscopy of gas phase molecules and their assembly: An overview of what has been achieved and where to go

MP Gaigeot - Spectrochimica Acta Part A: Molecular and …, 2021 - Elsevier
We hereby review molecular dynamics simulations for anharmonic gas phase spectroscopy
and provide some of our opinions of where the field is heading. With these new directions …

Graph theory for automatic structural recognition in molecular dynamics simulations

S Bougueroua, R Spezia, S Pezzotti, S Vial… - The Journal of …, 2018 - pubs.aip.org
Graph theory algorithms have been proposed in order to identify, follow in time, and
statistically analyze the changes in conformations that occur along molecular dynamics (MD) …

GaTewAY: Graph theory-based software for automatic analysis of molecular conformers generated over time

S Bougueroua, F Quessette, D Barth, MP Gaigeot - 2022 - chemrxiv.org
GaTewAY is a post-processing tool for molecular dynamics (MD) simulation databased on
graph theoretical techniques. The main idea is to construct 2D graphs from the 3D …

Assessing non-bonded aggregates populations: application to the concentration-dependent IR OH band of phenol

JP Galvez, J Zúñiga, J Cerezo - 2025 - chemrxiv.org
In this work, we present two alternative computational strategies to determine the
populations of non-bonded aggregates. One approach extracts these populations from …

GaTewAY: Graph theory based software for an automatic analyses of molecular conformers generated over time

F Quessette, D Barth, MP Gaigeot - 2022 - chemrxiv.org
GaTewAY is a post-processing tool for molecular dynamics (MD) simulation databased on
graph theoretical techniques. The main idea is to construct 2D graphs from the 3D …

Caractérisation de structures explorées dans les simulations de dynamique moléculaire.

S Bougueroua - 2017 - theses.hal.science
L'objectif de cette thèse est d'analyser et prédire les conformations d'un système moléculaire
en combinant la théorie des graphes et la chimie computationnelle. Dans le cadre des …