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Extending approximate Bayesian computation with supervised machine learning to infer demographic history from genetic polymorphisms using DIYABC Random …
Simulation‐based methods such as approximate Bayesian computation (ABC) are well‐
adapted to the analysis of complex scenarios of populations and species genetic history. In …
adapted to the analysis of complex scenarios of populations and species genetic history. In …
Towards a genetic theory of island biogeography: Inferring processes from multidimensional community‐scale data
Abstract Background MacArthur and Wilson's theory of island biogeography has been a
foundation for obtaining testable predictions from models of community assembly and for …
foundation for obtaining testable predictions from models of community assembly and for …
Process-based species delimitation leads to identification of more biologically relevant species
Most approaches to species delimitation to date have considered divergence-only models.
Although these models are appropriate for allopatric speciation, their failure to incorporate …
Although these models are appropriate for allopatric speciation, their failure to incorporate …
A demonstration of unsupervised machine learning in species delimitation
One major challenge to delimiting species with genetic data is successfully differentiating
population structure from species-level divergence, an issue exacerbated in taxa inhabiting …
population structure from species-level divergence, an issue exacerbated in taxa inhabiting …
Vanishing refuge? Testing the forest refuge hypothesis in coastal East Africa using genome‐wide sequence data for seven amphibians
High‐throughput sequencing data have greatly improved our ability to understand the
processes that contribute to current biodiversity patterns. The “vanishing refuge” …
processes that contribute to current biodiversity patterns. The “vanishing refuge” …
[HTML][HTML] Data-driven interpretable analysis for polysaccharide yield prediction
Y Tian, X Yang, N Chen, C Li, W Yang - Environmental Science and …, 2024 - Elsevier
Cornstalks show promise as a raw material for polysaccharide production through xylanase.
Rapid and accurate prediction of polysaccharide yield can facilitate process optimization …
Rapid and accurate prediction of polysaccharide yield can facilitate process optimization …
Discovery of Ongoing Selective Sweeps within Anopheles Mosquito Populations Using Deep Learning
Identification of partial sweeps, which include both hard and soft sweeps that have not
currently reached fixation, provides crucial information about ongoing evolutionary …
currently reached fixation, provides crucial information about ongoing evolutionary …
Genomic data from the Brazilian sibilator frog reveal contrasting pleistocene dynamics and regionalism in two South American dry biomes
Abstract Aim Knowledge about the Neotropical dry formations, particularly the Caatinga,
remains rudimentary compared to other biotas in the region. Here we address several …
remains rudimentary compared to other biotas in the region. Here we address several …
Evidence for niche conservatism in alpine beetles under a climate‐driven species pump model
Aim Past glacial cycles have generated lineage diversity in alpine habitats, acting as a
climate‐driven species pump. It is not clear how much this process contributes to ecological …
climate‐driven species pump. It is not clear how much this process contributes to ecological …
Phylogeographic model selection using convolutional neural networks
The discipline of phylogeography has evolved rapidly in terms of the analytical toolkit used
to analyse large genomic data sets. Despite substantial advances, analytical tools that could …
to analyse large genomic data sets. Despite substantial advances, analytical tools that could …