Monitoring antibiotic resistance genes in wastewater treatment: Current strategies and future challenges

AQ Nguyen, HP Vu, LN Nguyen, Q Wang… - Science of the Total …, 2021 - Elsevier
Antimicrobial resistance (AMR) is a growing threat to human and animal health. Progress in
molecular biology has revealed new and significant challenges for AMR mitigation given the …

Fitness costs of plasmids: a limit to plasmid transmission

A San Millan, RC MacLean - Microbiology spectrum, 2017 - journals.asm.org
Plasmids mediate the horizontal transmission of genetic information between bacteria,
facilitating their adaptation to multiple environmental conditions. An especially important …

Diverse plasmid systems and their ecology across human gut metagenomes revealed by PlasX and MobMess

MK Yu, EC Fogarty, AM Eren - Nature Microbiology, 2024 - nature.com
Plasmids alter microbial evolution and lifestyles by mobilizing genes that often confer fitness
in changing environments across clades. Yet our ecological and evolutionary understanding …

Plasmid fitness costs are caused by specific genetic conflicts enabling resolution by compensatory mutation

JPJ Hall, RCT Wright, E Harrison, KJ Muddiman… - PLoS …, 2021 - journals.plos.org
Plasmids play an important role in bacterial genome evolution by transferring genes
between lineages. Fitness costs associated with plasmid carriage are expected to be a …

High-throughput genetic engineering of nonmodel and undomesticated bacteria via iterative site-specific genome integration

JR Elmore, GN Dexter, H Baldino, JD Huenemann… - Science …, 2023 - science.org
Efficient genome engineering is critical to understand and use microbial functions. Despite
recent development of tools such as CRISPR-Cas gene editing, efficient integration of …

Ecological and evolutionary solutions to the plasmid paradox

MA Brockhurst, E Harrison - Trends in Microbiology, 2022 - cell.com
The'plasmid paradox'arises because, although plasmids are common features of bacterial
genomes, theoretically they should not exist: rates of conjugation were believed insufficient …

Emergence of plasmid stability under non-selective conditions maintains antibiotic resistance

T Wein, NF Hülter, I Mizrahi, T Dagan - Nature communications, 2019 - nature.com
Plasmid acquisition is an important mechanism of rapid adaptation and niche expansion in
prokaryotes. Positive selection for plasmid-coded functions is a major driver of plasmid …

Experimental design, population dynamics, and diversity in microbial experimental evolution

B Van den Bergh, T Swings, M Fauvart… - … and Molecular Biology …, 2018 - journals.asm.org
In experimental evolution, laboratory-controlled conditions select for the adaptation of
species, which can be monitored in real time. Despite the current popularity of such …

Exploring the costs of horizontal gene transfer

DA Baltrus - Trends in ecology & evolution, 2013 - cell.com
Horizontal gene transfer (HGT) is one of the most important evolutionary forces within
microbial populations. Although evidence for beneficial fitness effects of HGT is …

Survival and evolution of a large multidrug resistance plasmid in new clinical bacterial hosts

A Porse, K Schønning, C Munck… - Molecular biology and …, 2016 - academic.oup.com
Large conjugative plasmids are important drivers of bacterial evolution and contribute
significantly to the dissemination of antibiotic resistance. Although plasmid borne multidrug …