[HTML][HTML] Library preparation for next generation sequencing: A review of automation strategies

JF Hess, TA Kohl, M Kotrová, K Rönsch… - Biotechnology …, 2020 - Elsevier
Next generation sequencing is in the process of evolving from a technology used for
research purposes to one which is applied in clinical diagnostics. Recently introduced high …

Collections‐based science in the 21st century

VA Funk - Journal of Systematics and Evolution, 2018 - Wiley Online Library
Discoveries from collections‐based science change the way we perceive ourselves, our
environment, and our place in the universe. The 18th Century saw the beginning of formal …

Evolution of Rosaceae fruit types based on nuclear phylogeny in the context of geological times and genome duplication

Y **ang, CH Huang, Y Hu, J Wen, S Li… - Molecular biology …, 2017 - academic.oup.com
Fruits are the defining feature of angiosperms, likely have contributed to angiosperm
successes by protecting and dispersing seeds, and provide foods to humans and other …

Monocot plastid phylogenomics, timeline, net rates of species diversification, the power of multi‐gene analyses, and a functional model for the origin of monocots

TJ Givnish, A Zuluaga, D Spalink… - American Journal of …, 2018 - Wiley Online Library
Premise of the Study We present the first plastome phylogeny encompassing all 77 monocot
families, estimate branch support, and infer monocot‐wide divergence times and rates of …

Phylotranscriptomics resolves the phylogeny of Pooideae and uncovers factors for their adaptive evolution

L Zhang, X Zhu, Y Zhao, J Guo, T Zhang… - Molecular Biology …, 2022 - academic.oup.com
Adaptation to cool climates has occurred several times in different angiosperm groups.
Among them, Pooideae, the largest grass subfamily with∼ 3,900 species including wheat …

Major clades and a revised classification of Magnolia and Magnoliaceae based on whole plastid genome sequences via genome skimming

YB Wang, BB Liu, ZL Nie, HF Chen… - … of Systematics and …, 2020 - Wiley Online Library
With more than 300 species, the Magnoliaceae family represents a major Magnoliid lineage
that is disjunctly distributed in Asia and the New World. The classification of Magnolia sl has …

Phylogenetic relationships and chloroplast capture in the Amelanchier-Malacomeles-Peraphyllum clade (Maleae, Rosaceae): Evidence from chloroplast genome and …

BB Liu, CS Campbell, DY Hong, J Wen - Molecular Phylogenetics and …, 2020 - Elsevier
Abstract The Amelanchier-Malacomeles-Peraphyllum (AMP) clade consists of ca. 26
species distributed in North and Central America, Europe, Asia, and northwestern Africa …

Capturing single‐copy nuclear genes, organellar genomes, and nuclear ribosomal DNA from deep genome skimming data for plant phylogenetics: A case study in …

BB Liu, ZY Ma, C Ren, RGJ Hodel… - … of Systematics and …, 2021 - Wiley Online Library
With the decreasing cost and availability of many newly developed bioinformatics pipelines,
next‐generation sequencing (NGS) has revolutionized plant systematics in recent years …

Phylogenomics and morphological evolution of the mega-diverse genus Artemisia (Asteraceae: Anthemideae): implications for its circumscription and infrageneric …

B Jiao, C Chen, M Wei, G Niu, J Zheng… - Annals of …, 2023 - academic.oup.com
Abstract Background and Aims Artemisia is a mega-diverse genus consisting of~ 400
species. Despite its medicinal importance and ecological significance, a well-resolved …

Phylogenomic relationships and species identification of the olive genus Olea (Oleaceae)

WP Dong, JH Sun, YL Liu, C Xu… - … of Systematics and …, 2022 - Wiley Online Library
The olive genus Olea includes c. 30–40 taxa in three subgenera (Olea, Tetrapilus, and
Paniculatae) within the family Oleaceae. Historically, the Olea genus was classified into four …