Impact of micro-habitat fragmentation on microbial population growth dynamics
D Mant, T Orevi, N Kashtan - The ISME Journal, 2024 - academic.oup.com
Microbial communities thrive in virtually every habitat on Earth and are essential to the
function of diverse ecosystems. Most microbial habitats are not spatially continuous and well …
function of diverse ecosystems. Most microbial habitats are not spatially continuous and well …
Tracking the stochastic growth of bacterial populations in microfluidic droplets
D Taylor, N Verdon, P Lomax, RJ Allen… - Physical biology, 2022 - iopscience.iop.org
Bacterial growth in microfluidic droplets is relevant in biotechnology, in microbial ecology,
and in understanding stochastic population dynamics in small populations. However, it has …
and in understanding stochastic population dynamics in small populations. However, it has …
Droplet-based methodology for investigating bacterial population dynamics in response to phage exposure
An alarming rise in antimicrobial resistance worldwide has spurred efforts into the search for
alternatives to antibiotic treatments. The use of bacteriophages, bacterial viruses harmless to …
alternatives to antibiotic treatments. The use of bacteriophages, bacterial viruses harmless to …
Bacterial aggregation triggered by low-level antibiotic-mediated lysis
Suspended bacterial aggregates play a central role in ocean biogeochemistry, industrial
processes and probably many clinical infections–yet the factors that trigger aggregation …
processes and probably many clinical infections–yet the factors that trigger aggregation …
Label-free analysis of bacterial growth and lysis at the single-cell level using droplet microfluidics and object detection-oriented deep learning
Bacteria identification and counting at the small population scale is important to many
applications in the food safety industry, the diagnostics of infectious diseases and the study …
applications in the food safety industry, the diagnostics of infectious diseases and the study …
A compressed logistic equation on bacteria growth: inferring time-dependent growth rate
C Pinto, K Shimakawa - Physical Biology, 2022 - iopscience.iop.org
We propose a compressed logistic model for bacterial growth by invoking a time-dependent
rate instead of the intrinsic growth rate (constant), which was adopted in traditional logistic …
rate instead of the intrinsic growth rate (constant), which was adopted in traditional logistic …
Cell size control shapes fluctuations in colony population
Exponentially growing cells regulate their size by controlling their timing of division. Since
two daughter cells are born as a result of this cell splitting, cell size regulation has a direct …
two daughter cells are born as a result of this cell splitting, cell size regulation has a direct …
Fluctuation relations and fitness landscapes of growing cell populations
We construct a pathwise formulation of a growing population of cells, based on two different
samplings of lineages within the population, namely the forward and backward samplings …
samplings of lineages within the population, namely the forward and backward samplings …
[PDF][PDF] Spectral analysis and sorting of microbial organisms using a spectral sorter
This chapter discusses the problems related to the application of conventional flow
cytometers to microbiology. To address some of those limitations, the concept of spectral …
cytometers to microbiology. To address some of those limitations, the concept of spectral …
Cell size regulation and proliferation fluctuations in single-cell derived colonies
Exponentially growing cells regulate their size by controlling their timing of division. Since
two daughter cells are born as a result of this cell splitting, cell size regulation has a direct …
two daughter cells are born as a result of this cell splitting, cell size regulation has a direct …